RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RPL31P62899 125 aaKnown RBP21.52■■□□□ 1.04
VEGFA-207ENST00000413642 GUCA2AQ02747 115 aa21.52■■□□□ 1.04
VEGFA-207ENST00000413642 BLMHQ13867 455 aa21.52■■□□□ 1.04
VEGFA-207ENST00000413642 UTS2BQ765I0 119 aa21.52■■□□□ 1.04
VEGFA-207ENST00000413642 TMEM86BQ8N661 226 aa21.52■■□□□ 1.04
VEGFA-207ENST00000413642 SSMEM1Q8WWF3 244 aa21.52■■□□□ 1.04
VEGFA-207ENST00000413642 RFT1Q96AA3 541 aa21.52■■□□□ 1.04
VEGFA-207ENST00000413642 UNKLQ9H9P5 680 aaKnown RBP21.52■■□□□ 1.04
VEGFA-207ENST00000413642 SPRY1O43609 319 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-207ENST00000413642 PIPP12273 146 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-207ENST00000413642 EEF1B2P24534 225 aaKnown RBP21.51■■□□□ 1.03
VEGFA-207ENST00000413642 RBP2P50120 134 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 MTCP1P56278 107 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 RELBQ01201 579 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 ZNF273Q14593 569 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 LDLRAD3Q86YD5 345 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 MKXQ8IYA7 352 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 C11orf42Q8N5U0 333 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 ASCC1Q8N9N2 400 aaKnown RBP21.51■■□□□ 1.03
VEGFA-207ENST00000413642 DNAAF1Q8NEP3 725 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 OR13C9Q8NGT0 318 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 CNIH3Q8TBE1 160 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 MRPL48Q96GC5 212 aaKnown RBP21.51■■□□□ 1.03
VEGFA-207ENST00000413642 SPACA5Q96QH8 159 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 ZNF747Q9BV97 191 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 RBFOX1Q9NWB1 397 aaKnown RBP21.51■■□□□ 1.03
VEGFA-207ENST00000413642 POMT1Q9Y6A1 747 aa21.51■■□□□ 1.03
VEGFA-207ENST00000413642 ZNF737O75373 536 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 ZFPL1O95159 310 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 LIMS3P0CW19 117 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 LIMS4P0CW20 117 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 BCL3P20749 454 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 PEX2P28328 305 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 DUSP1P28562 367 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 SAA4P35542 130 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 GTF2A1P52655 376 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-207ENST00000413642 RCN1Q15293 331 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 TBC1D15Q8TC07 691 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 C17orf50Q8WW18 174 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 CYGBQ8WWM9 190 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 EMG1Q92979 244 aaKnown RBP21.5■■□□□ 1.03
VEGFA-207ENST00000413642 RDH12Q96NR8 316 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 PDCD1LG2Q9BQ51 273 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 INPP5EQ9NRR6 644 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 C1RLQ9NZP8 487 aa21.5■■□□□ 1.03
VEGFA-207ENST00000413642 TMEM82A0PJX8 343 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 MEIOCA2RUB1 952 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 K7N7A8 449 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 ANGPTL7O43827 346 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 PRKACBP22694 351 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 UBE2E1P51965 193 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 SNU13P55769 128 aaKnown RBP21.49■■□□□ 1.03
VEGFA-207ENST00000413642 KLHL22Q53GT1 634 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 ZNF691Q5VV52 312 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 NCR3LG1Q68D85 454 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 OPALINQ96PE5 141 aa21.49■■□□□ 1.03
VEGFA-207ENST00000413642 IGKV1-12A0A0C4DH73 117 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 IGKV1D-12P01611 117 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 CHRM2P08172 466 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 TAF9Q16594 264 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 CRIP3Q6Q6R5 217 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 FAM234AQ9H0X4 552 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 FGF20Q9NP95 211 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-207ENST00000413642 ZNRD1Q9P1U0 126 aa21.48■■□□□ 1.03
VEGFA-207ENST00000413642 GPR137BO60478 399 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 CRYBA1P05813 215 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 FBP1P09467 338 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 ETV1P50549 477 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 GBX2P52951 348 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-207ENST00000413642 PDZK1IP1Q13113 114 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 XAF1Q6GPH4 301 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 LHFPL2Q6ZUX7 228 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 OR52N4Q8NGI2 321 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 OR5D18Q8NGL1 313 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 OR5D13Q8NGL4 314 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 SPSB1Q96BD6 273 aa21.47■■□□□ 1.03
VEGFA-207ENST00000413642 HAND1O96004 215 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 OCM2P0CE71 109 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 OCMP0CE72 109 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-207ENST00000413642 PAX6P26367 422 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 DLX6P56179 175 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 OR2G6Q5TZ20 316 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 FAM58AQ8N1B3 248 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 OR5AK2Q8NH90 309 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 RGP1Q92546 391 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-207ENST00000413642 AJUBAQ96IF1 538 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 MYCBPQ99417 103 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-207ENST00000413642 ZCCHC4Q9H5U6 513 aa21.46■■□□□ 1.03
VEGFA-207ENST00000413642 CAB39Q9Y376 341 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-207ENST00000413642 SF3B6Q9Y3B4 125 aaKnown RBP21.46■■□□□ 1.03
VEGFA-207ENST00000413642 TRBV2A0A0J9YWF9 115 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 PRKACAP17612 351 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 COX7A1P24310 79 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 RAG2P55895 527 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 EDDM3BP56851 147 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 ADARB1P78563 741 aaKnown RBP21.45■■□□□ 1.02
VEGFA-207ENST00000413642 ZNF782Q6ZMW2 699 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-207ENST00000413642 C17orf107Q6ZR85 190 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 TPRX1Q8N7U7 411 aa21.45■■□□□ 1.02
VEGFA-207ENST00000413642 JAM3Q9BX67 310 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms