RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 C9J4A7 227 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 NRASP01111 189 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 CST2P09228 141 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 OR8U9P0C7N5 309 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 RFC3P40938 356 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 AKR1D1P51857 326 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 F2RL1P55085 397 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 MLF1P58340 268 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 PDCD1Q15116 288 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 PHLDA2Q53GA4 152 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 FBXL14Q8N1E6 418 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 AGBL5Q8NDL9 886 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 OR8U1Q8NH10 309 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 TMEM38BQ9NVV0 291 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 KLF2Q9Y5W3 355 aaPredicted RBP13□□□□□ -0.33
TTC39A-208ENST00000413473 NSG1A0A0A6YYJ2 146 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 GJE1A6NN92 205 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 DIRAS3O95661 229 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
TTC39A-208ENST00000413473 HTR5AP47898 357 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 CARD18P57730 90 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 SWI5Q1ZZU3 235 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 PLEKHA2Q9HB19 425 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 SIT1Q9Y3P8 196 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 A0A0G2JMM0 328 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 A0A1W2PPB8 328 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 A0A1W2PRS3 328 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 KIR3DP1A8MWS1 328 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 CRYBA1P05813 215 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 RAB13P51153 203 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 B3GALT5-AS1P59052 145 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 FAM3AP98173 230 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 ZNF528Q3MIS6 628 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 SLC22A25Q6T423 547 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 LHFPL2Q6ZUX7 228 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 UBAC2Q8NBM4 344 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 KIRREL1Q96J84 757 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 FREM2Q5SZK8 3169 aa12.99□□□□□ -0.33
TTC39A-208ENST00000413473 MEX3AA1L020 520 aaKnown RBP12.98□□□□□ -0.33
TTC39A-208ENST00000413473 OR6C6A6NF89 314 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 E5RGE8 158 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 TERTO14746 1132 aaKnown RBP12.98□□□□□ -0.33
TTC39A-208ENST00000413473 XRCC2O43543 280 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 DVL1P1P54792 670 aaPredicted RBP12.98□□□□□ -0.33
TTC39A-208ENST00000413473 PSG4Q00888 419 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 AAED1Q7RTV5 226 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.98□□□□□ -0.33
TTC39A-208ENST00000413473 OSR2Q8N2R0 312 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 OR2Y1Q8NGV0 311 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 OR14L1PQ8NHC6 308 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 RXFP4Q8TDU9 374 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 ST3GAL6Q9Y274 331 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 NSG2Q9Y328 171 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 CXCL13O43927 109 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 HEXAP06865 529 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 OR5L1Q8NGL2 311 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 FGFBP3Q8TAT2 258 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 AKR1E2Q96JD6 320 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 BCO1Q9HAY6 547 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
TTC39A-208ENST00000413473 ZNF716A6NP11 495 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 FAM157AC9JC47 383 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 CFIP05156 583 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 ZNF92Q03936 586 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 PEA15Q15121 130 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 AKIRIN2Q53H80 203 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 TMEM42Q69YG0 159 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 OR11L1Q8NGX0 322 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 RGS19P49795 217 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 CEACAM16Q2WEN9 425 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 ETV3LQ6ZN32 361 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 LIAT1Q6ZQX7 453 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 GGNQ86UU5 652 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 LYPD6BQ8NI32 183 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 GLYATL2Q8WU03 294 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 SECTM1Q8WVN6 248 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 PIGCQ92535 297 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 WFDC1Q9HC57 220 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 FAM212BQ9NTI7 297 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-208ENST00000413473 TIMM10BQ9Y5J6 103 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 NCKAP5O14513 1909 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 H7C1Q1 480 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 DNPH1O43598 174 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 RFPL3SP0C7P2 107 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 SPP1P10451 314 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 SRD5A2P31213 254 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 HOXA1P49639 335 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-208ENST00000413473 AVPI1Q5T686 147 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 BATF2Q8N1L9 274 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 OR52M1Q8NGK5 317 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 C2CD4CQ8TF44 421 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 FOXB1Q99853 325 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 WNT5BQ9H1J7 359 aa12.97□□□□□ -0.33
TTC39A-208ENST00000413473 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms