RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CLPSP04118 112 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 GABRB1P18505 474 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 ATF1P18846 271 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SOX18P35713 384 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 PSMB2P49721 201 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MMP15P51511 669 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 GNG3P63215 75 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MPPED2Q15777 294 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SIAH3Q8IW03 269 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 OR51F2Q8NH61 342 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 EMG1Q92979 244 aaKnown RBP7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SDSLQ96GA7 329 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MESP1Q9BRJ9 268 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PPH5 198 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 H3BMH7 237 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 KLF4O43474 513 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 GPANK1O95872 356 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 EPXP11678 715 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MMP16P51512 607 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 PPP1CBP62140 327 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 FFAR4Q5NUL3 377 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 Q6ZTK2 550 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SGPP2Q8IWX5 399 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 BPIFB2Q8N4F0 458 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 GIMAP1Q8WWP7 306 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 TP53RKQ96S44 253 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SULT4A1Q9BR01 284 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SRXN1Q9BYN0 137 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 CLDN16Q9Y5I7 305 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 SCN8AQ9UQD0 1980 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A0G2JMM0 328 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PPB8 328 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PRS3 328 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 KIR3DP1A8MWS1 328 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 H3BVH4 76 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MPPED1O15442 326 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 ZFPL1O95159 310 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MT-ND4P03905 459 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 IL2RGP31785 369 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 CLDN12P56749 244 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 KLF3P57682 345 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-211ENST00000413186 STAC2Q6ZMT1 411 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 ZNF519Q8TB69 540 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 PTDSS2Q9BVG9 487 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 BARHL1Q9BZE3 327 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 CGGBP1Q9UFW8 167 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MRM2Q9UI43 246 aaKnown RBP7.49□□□□□ -1.21
SYNE1-211ENST00000413186 CHST2Q9Y4C5 530 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MPC1Q9Y5U8 109 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 MUC22E2RYF6 1773 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-211ENST00000413186 TMEM200CA6NKL6 621 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 C10orf142B7Z368 130 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 OPN1MWP04001 364 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 CSF3P09919 207 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 OPN1MW2P0DN77 364 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 OPN1MW3P0DN78 364 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 FAHP16930 419 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 RAB6AP20340 208 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 AKR1C2P52895 323 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 Q0VFX4 171 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 STEAP1BQ6NZ63 245 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 PLXDC2Q6UX71 529 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 Q8IYB0 196 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 BPIFCQ8NFQ6 507 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 CNTNAP3BQ96NU0 1288 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 DEPPQ9NTK1 212 aa7.49□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1W2PR80 420 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 K7ENP7 123 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 CELA3AP09093 270 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 UQCRFS1P47985 274 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 SULT1A1P50225 295 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 ZNF85Q03923 595 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 CAMK2BQ13554 666 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 FJX1Q86VR8 437 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 C17orf78Q8N4C9 275 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 FBXO17Q96EF6 278 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 PPIL3Q9H2H8 161 aaKnown RBP7.48□□□□□ -1.21
SYNE1-211ENST00000413186 TUBD1Q9UJT1 453 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 CACNA1BQ00975 2339 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 OR5B21A6NL26 309 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 C17orf51A8MQB3 221 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 OGG1O15527 345 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 ACTL6BO94805 426 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 C1QBP02746 253 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 THY1P04216 161 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 BTN1A1Q13410 526 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 CMTM1Q8IZ96 169 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 FAM169BQ8N8A8 192 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 MDS2Q8NDY4 140 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 GCDHQ92947 438 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-211ENST00000413186 TRAV20A0A0B4J274 112 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 TMEM82A0PJX8 343 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 LRRC3CA6NJW4 275 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 DEGS1O15121 323 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 TK1P04183 234 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 EDN3P14138 238 aa7.48□□□□□ -1.21
SYNE1-211ENST00000413186 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms