RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 Q6ZTK2 550 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TMPRSS11FQ6ZWK6 438 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 BCDIN3DQ7Z5W3 292 aaKnown RBP4.55□□□□□ -1.68
LINC00342-201ENST00000412393 CEACAM19Q7Z692 300 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 DTX2Q86UW9 622 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 COMTD1Q86VU5 262 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 KLBQ86Z14 1044 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 RBM45Q8IUH3 476 aaKnown RBP4.55□□□□□ -1.68
LINC00342-201ENST00000412393 FBXL14Q8N1E6 418 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 KDM8Q8N371 416 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 KCNRGQ8N5I3 272 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.55□□□□□ -1.68
LINC00342-201ENST00000412393 WDR31Q8NA23 367 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 POMGNT2Q8NAT1 580 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 DNAAF1Q8NEP3 725 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 PXT1Q8NFP0 134 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 OR2T33Q8NG76 320 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TAAR8Q969N4 342 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 KTI12Q96EK9 354 aaPredicted RBP4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TEAD3Q99594 435 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 C12orf57Q99622 126 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 PTDSS2Q9BVG9 487 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TMED9Q9BVK6 235 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 PLA2G12AQ9BZM1 189 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TMEM27Q9HBJ8 222 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 NOX3Q9HBY0 568 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 CMC2Q9NRP2 79 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TMEM100Q9NV29 134 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 H2AFY2Q9P0M6 372 aaPredicted RBP4.55□□□□□ -1.68
LINC00342-201ENST00000412393 RHCGQ9UBD6 479 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 SIRT4Q9Y6E7 314 aaPredicted RBP4.55□□□□□ -1.68
LINC00342-201ENST00000412393 TLN2Q9Y4G6 2542 aa4.55□□□□□ -1.68
LINC00342-201ENST00000412393 FN1P02751 2386 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 IGKV1D-42A0A075B6H8 117 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 TRAV36DV7A0A075B6V5 113 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 A0A087WUJ7 227 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 TMEM218A2RU14 115 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 RFPL4AA6NLU0 287 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF879B4DU55 563 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF587BE7ETH6 402 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 RFPL4AL1F8VTS6 287 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 H7C417 338 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 SULT1C2O00338 296 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 BHLHE40O14503 412 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 IMPA2O14732 288 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 NDUFS7O75251 213 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ALDOBP05062 364 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 SBK2P0C263 348 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR2T7P0C7T2 308 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ATF1P18846 271 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 SLC2A5P22732 501 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 MPZP25189 248 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 GRPRP30550 384 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ACVR1BP36896 505 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 VEGFCP49767 419 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 MEOX2P50222 304 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 FABP6P51161 128 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 CCR6P51684 374 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 CLDN17P56750 224 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 RPS11P62280 158 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 SPOCK1Q08629 439 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR1Q1Q15612 314 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 HIKESHIQ53FT3 197 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 PAN3Q58A45 887 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ALG10BQ5I7T1 473 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 HES5Q5TA89 166 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 NIPAL3Q6P499 406 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 RPL22L1Q6P5R6 122 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ULK3Q6PHR2 472 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 B3GLCTQ6Y288 498 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF813Q6ZN06 617 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 RANBP3LQ86VV4 465 aaPredicted RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 SVBPQ8N300 66 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 IQCF1Q8N6M8 205 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR10H5Q8NGA6 315 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR1K1Q8NGR3 316 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR6N1Q8NGY5 312 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR2T27Q8NH04 317 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OR4Q3Q8NH05 313 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 GLYATL2Q8WU03 294 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 FCAMRQ8WWV6 532 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 BCL2L2Q92843 193 aaPredicted RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ELMOD3Q96FG2 381 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 S100A16Q96FQ6 103 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 MRPL48Q96GC5 212 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ADAD1Q96M93 576 aaKnown RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 HS6ST2Q96MM7 605 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 CLUHP3Q96NS8 147 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OXGR1Q96P68 337 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ALKBH3Q96Q83 286 aaPredicted RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 DDOQ99489 341 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 WFDC6Q9BQY6 131 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ZNF251Q9BRH9 671 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 SOX7Q9BT81 388 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 ALG8Q9BVK2 526 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 LINC00470Q9BZP3 86 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 NKX6-2Q9C056 277 aaPredicted RBP4.54□□□□□ -1.68
LINC00342-201ENST00000412393 TUBA4BQ9H853 241 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 FKRPQ9H9S5 495 aa4.54□□□□□ -1.68
LINC00342-201ENST00000412393 OBP2BQ9NPH6 170 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms