RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TRBV23-1A0A0A0MS06 115 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 IGKV1-12A0A0C4DH73 117 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 MEX3AA1L020 520 aaKnown RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 SPRY1O43609 319 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF737O75373 536 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 ZFPL1O95159 310 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 IGKV1D-12P01611 117 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 BCL3P20749 454 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 IER3P46695 156 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 GTF2A1P52655 376 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 CNN3Q15417 329 aaKnown RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 MKXQ8IYA7 352 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 DNAAF1Q8NEP3 725 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 RDH12Q96NR8 316 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 PDCD1LG2Q9BQ51 273 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 METTL8Q9H825 291 aaKnown RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 FGF20Q9NP95 211 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 C1RLQ9NZP8 487 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 HHLA2Q9UM44 414 aa15.57■□□□□ 0.08
SF3A1-202ENST00000411423 RPL36Q9Y3U8 105 aaKnown RBP15.57■□□□□ 0.08
SF3A1-202ENST00000411423 TMEM82A0PJX8 343 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 K7N7A8 449 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 SLC1A7O00341 560 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 FADS2O95864 444 aaKnown RBP15.56■□□□□ 0.08
SF3A1-202ENST00000411423 SERPINA3P01011 423 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF20P17024 532 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 PAX6P26367 422 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 SAA4P35542 130 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 POU3F4P49335 361 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 RBP2P50120 134 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ETV1P50549 477 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 RPL31P62899 125 aaKnown RBP15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ADARB1P78563 741 aaKnown RBP15.56■□□□□ 0.08
SF3A1-202ENST00000411423 RCN1Q15293 331 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 TAF9Q16594 264 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ASPHD2Q6ICH7 369 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 TCF23Q7RTU1 214 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 TMEM86BQ8N661 226 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF676Q8N7Q3 588 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 OR13C3Q8NGS6 347 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 OR13C9Q8NGT0 318 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 RGP1Q92546 391 aaPredicted RBP15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF747Q9BV97 191 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ZNRD1Q9P1U0 126 aa15.56■□□□□ 0.08
SF3A1-202ENST00000411423 ANGPTL7O43827 346 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 PIPP12273 146 aaPredicted RBP15.55■□□□□ 0.08
SF3A1-202ENST00000411423 DUSP1P28562 367 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 UBE2E1P51965 193 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 ATP1B3P54709 279 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 DLX6P56179 175 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 MTCP1P56278 107 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 GUCA2AQ02747 115 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 LAIR2Q6ISS4 152 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 C17orf107Q6ZR85 190 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 EGFL6Q8IUX8 553 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF555Q8NEP9 628 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 OR52N4Q8NGI2 321 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 SSMEM1Q8WWF3 244 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 EMG1Q92979 244 aaKnown RBP15.55■□□□□ 0.08
SF3A1-202ENST00000411423 OPALINQ96PE5 141 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 JAM3Q9BX67 310 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 INPP5EQ9NRR6 644 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 POMT1Q9Y6A1 747 aa15.55■□□□□ 0.08
SF3A1-202ENST00000411423 SIRT4Q9Y6E7 314 aaPredicted RBP15.55■□□□□ 0.08
SF3A1-202ENST00000411423 H0YAE9 185 aa15.54■□□□□ 0.08
SF3A1-202ENST00000411423 SNU13P55769 128 aaKnown RBP15.54■□□□□ 0.08
SF3A1-202ENST00000411423 PDZK1IP1Q13113 114 aa15.54■□□□□ 0.08
SF3A1-202ENST00000411423 OR2G6Q5TZ20 316 aa15.54■□□□□ 0.08
SF3A1-202ENST00000411423 ASCC1Q8N9N2 400 aaKnown RBP15.54■□□□□ 0.08
SF3A1-202ENST00000411423 OR5D18Q8NGL1 313 aa15.54■□□□□ 0.08
SF3A1-202ENST00000411423 CYGBQ8WWM9 190 aa15.54■□□□□ 0.08
SF3A1-202ENST00000411423 FAM234AQ9H0X4 552 aa15.54■□□□□ 0.08
SF3A1-202ENST00000411423 TRRAPQ9Y4A5 3859 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 TRBV2A0A0J9YWF9 115 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 MEIOCA2RUB1 952 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 GPR137BO60478 399 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 PSPNO60542 156 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 HAND1O96004 215 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 LALBAP00709 142 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 MT-ND2P03891 347 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 CHRM2P08172 466 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 PRKACBP22694 351 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 BMXP51813 675 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 SRSF4Q08170 494 aaKnown RBP15.53■□□□□ 0.08
SF3A1-202ENST00000411423 KLHL22Q53GT1 634 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 NCR3LG1Q68D85 454 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 LHFPL2Q6ZUX7 228 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 TPRX1Q8N7U7 411 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 RPS4Y2Q8TD47 263 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 SPSB1Q96BD6 273 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 CLEC2DQ9UHP7 191 aa15.53■□□□□ 0.08
SF3A1-202ENST00000411423 GNAO1P09471 354 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 EEF1B2P24534 225 aaKnown RBP15.52■□□□□ 0.08
SF3A1-202ENST00000411423 GBX2P52951 348 aaPredicted RBP15.52■□□□□ 0.08
SF3A1-202ENST00000411423 ZP1P60852 638 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 BLMHQ13867 455 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 DOC2BQ14184 412 aa15.52■□□□□ 0.08
SF3A1-202ENST00000411423 OGFRL1Q5TC84 451 aaPredicted RBP15.52■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF782Q6ZMW2 699 aaPredicted RBP15.52■□□□□ 0.08
SF3A1-202ENST00000411423 FAM58AQ8N1B3 248 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms