RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PPYP01298 95 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 GOLGA6DP0CG33 693 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 COX8AP10176 69 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SDC1P18827 310 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCNA2P20248 432 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PRKACBP22694 351 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 GCHFRP30047 84 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 MAN1A1P33908 653 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 KDELR2P33947 212 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 IFNGR2P38484 337 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 EIF2DP41214 584 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 MTNR1AP48039 350 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CDK9P50750 372 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 RARSP54136 660 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 EMP1P54849 157 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 EIF3BP55884 814 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 RAP1BP61224 184 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 YWHAZP63104 245 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 ACTG2P63267 376 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SEMG2Q02383 582 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A11Q02978 314 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CDK18Q07002 472 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCDC173Q0VFZ6 552 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 NPRL3Q12980 569 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SPP2Q13103 211 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC15A2Q16348 729 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 BATFQ16520 125 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A35Q3KQZ1 300 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OCIAD2Q56VL3 154 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 C3orf38Q5JPI3 329 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 C1orf137Q5JT78 98 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CFAP126Q5VTH2 177 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM236Q5W0B7 351 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR52E8Q6IFG1 317 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 RASL11AQ6T310 242 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 EPGNQ6UW88 154 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 UNQ5815/PRO19632Q6UWF5 114 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 IL20RBQ6UXL0 311 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 FBXW12Q6X9E4 464 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A48Q6ZT89 311 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 TSEN54Q7Z6J9 526 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 NRMQ8IXM6 262 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 C10orf111Q8N326 155 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 DEFB123Q8N688 67 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR10G3Q8NGC4 313 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR4P4Q8NGL7 312 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR10Z1Q8NGY1 313 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR5K2Q8NHB8 316 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SCAMP5Q8TAC9 235 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PP6455Q8WZ26 134 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 FGF13Q92913 245 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 BIRC7Q96CA5 298 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 LINC00208Q96KT6 92 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 ZNF830Q96NB3 372 aaPredicted RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 LYSMD1Q96S90 227 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 OMDQ99983 421 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 MRPL34Q9BQ48 92 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 MRPL45Q9BRJ2 306 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 ALG12Q9BV10 488 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SPATA16Q9BXB7 569 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 BBS2Q9BXC9 721 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 TBC1D10AQ9BXI6 508 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 STK31Q9BXU1 1019 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SHCBP1LQ9BZQ2 653 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SNX25Q9H3E2 840 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 TXNIPQ9H3M7 391 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PIGMQ9H3S5 423 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 Q9HAA7 133 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 METTL5Q9NRN9 209 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CENPMQ9NSP4 180 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 MRGBPQ9NV56 204 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 DNAJC28Q9NX36 388 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 DDX56Q9NY93 547 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 TVP23BQ9NYZ1 205 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 EHFQ9NZC4 300 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 CLN8Q9UBY8 286 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 ZMAT5Q9UDW3 170 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PFDN2Q9UHV9 154 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 SERPINA10Q9UK55 444 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 BOKQ9UMX3 212 aaPredicted RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PPIEQ9UNP9 301 aaKnown RBP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLLPQ9Y342 182 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 URGCP-MRPS24S4R325 110 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PHIPQ8WWQ0 1821 aa-2.31□□□□□ -2.78
RNU4-88P-201ENST00000411220 PTPRUQ92729 1446 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CEMIPQ8WUJ3 1361 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 LOC105369274A0A096LPK9 316 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 LOC102723532A0A0G2JNH3 316 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 IGSF23A1L1A6 192 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 ISPDA4D126 451 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRIM64BA6NI03 449 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 FAM223BA6NKX1 122 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CLDN24A6NM45 220 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CPSF4LA6NMK7 179 aaKnown RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CENPBD1B2RD01 187 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GPR89AB7ZAQ6 455 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 KRBOX1C9JBD0 128 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 C12orf77C9JDV5 145 aa-2.32□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms