RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 STMN4Q9H169 189 aaPredicted RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 ASB7Q9H672 318 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 HPF1Q9NWY4 346 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 DOK5Q9P104 306 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC23A2Q9UGH3 650 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TAC3Q9UHF0 121 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 PSORS1C2Q9UIG4 136 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 LINC00588Q9Y4M8 146 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 DDX49Q9Y6V7 483 aaKnown RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGSF10Q6WRI0 2623 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 A0A075B6Q4 140 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGKV3D-7A0A0C4DH55 119 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGKV3OR2-268A0A0C4DH90 116 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 LOC102725191A0A1B0GVB3 256 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF99A8MXY4 864 aaPredicted RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 F8VP50 259 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 MYL12BO14950 172 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 SH2D1AO60880 128 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 TDP2O95551 362 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 SERPINA3P01011 423 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 PDYNP01213 254 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 HLA-AP01891 365 aaKnown RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 RAB5AP20339 215 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 S100A2P29034 98 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 IMPA1P29218 277 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 TAGLN2P37802 199 aaKnown RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 GPR4P46093 362 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 IFNAR2P48551 515 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 XKP51811 444 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR2B8PP59922 312 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 PTPRKQ15262 1439 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 C10orf91Q5T1B1 145 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 RGS9BPQ6ZS82 235 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 FAM231DQ6ZW35 169 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 VKORC1L1Q8N0U8 176 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR7G2Q8NG99 324 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR11G2Q8NGC1 345 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR4K2Q8NGD2 314 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR4X1Q8NH49 305 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR1S1Q8NH92 325 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 NT5C3BQ969T7 300 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 WDR90Q96KV7 1748 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 UCK2Q9BZX2 261 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF436Q9C0F3 470 aaPredicted RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 CYSTM1Q9H1C7 97 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 TMEM165Q9HC07 324 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 PRSS16Q9NQE7 514 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 DDX18Q9NVP1 670 aaKnown RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 VPREB3Q9UKI3 123 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 HRNRQ86YZ3 2850 aaPredicted RBP-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 ADAMTSL3P82987 1691 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 JCADQ9P266 1359 aa-0.34□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGKV3-7A0A075B6H7 116 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 A0A0B4J2E0 115 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ARRDC5A6NEK1 342 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 C9JQL5 133 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 UPK1AO00322 258 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 NDUFS5O43920 106 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 CCNB2O95067 398 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 GUCA1CO95843 209 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ERCC1P07992 297 aaPredicted RBP-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 GTF2F2P13984 249 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ALOX5APP20292 161 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 AP1S2P56377 157 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 GPM6BQ13491 265 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 SSX1Q16384 188 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 DEFB115Q30KQ5 88 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ALKBH6Q3KRA9 238 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 WDR82Q6UXN9 313 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 UNQ6190/PRO20217Q6UXQ8 127 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 C2orf91Q6ZV80 131 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 CYP4Z2PQ8N1L4 340 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 CYB561A3Q8NBI2 242 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ELMO1Q92556 727 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ADTRPQ96IZ2 230 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 SCGB3A2Q96PL1 93 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 GABRG3Q99928 467 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 CENPKQ9BS16 269 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ZYG11BQ9C0D3 744 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 ARV1Q9H2C2 271 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 PITPNC1Q9UKF7 332 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 KDM5BQ9UGL1 1544 aa-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.35□□□□□ -2.47
RNU2-55P-201ENST00000411146 PLCH2O75038 1416 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 J3QT63 122 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 NOL3O60936 208 aaKnown RBP-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 OR2A4O95047 310 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 PTHP01270 115 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 C1QCP02747 245 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 MYL2P10916 166 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 MSR1P21757 451 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 HTR2CP28335 458 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 MTPNP58546 118 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 RAB10P61026 200 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 RPL10AP62906 217 aaKnown RBP-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 HOXC5Q00444 222 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 KDSRQ06136 332 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 OTUD6AQ7L8S5 288 aa-0.36□□□□□ -2.47
RNU2-55P-201ENST00000411146 DPPA2Q7Z7J5 298 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms