RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 FAM157AC9JC47 383 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 JTBO76095 146 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 VAMP5O95183 116 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 LIFP15018 202 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 EPHA8P29322 1005 aaPredicted RBP13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 F2RL1P55085 397 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 RSU1Q15404 277 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 OPN5Q6U736 354 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 DHRS11Q6UWP2 260 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 MAML2Q8IZL2 1156 aaPredicted RBP13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 SULT4A1Q9BR01 284 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 EGLN1Q9GZT9 426 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
LYSMD4-204ENST00000409796 A0A0J9YW62 118 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 ZNF850A8MQ14 1090 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 HGFACQ04756 655 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 FABP9Q0Z7S8 132 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 FAM76BQ5HYJ3 339 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 ETV3LQ6ZN32 361 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 KIRREL1Q96J84 757 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 ANGPTL4Q9BY76 406 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 C1orf196B1AJZ1 125 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 TNFSF11O14788 317 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 TXNL1O43396 289 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 MBPP02686 304 aaPredicted RBP13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 FBP1P09467 338 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 CRYGSP22914 178 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 DSCR4P56555 118 aaPredicted RBP13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 BRICD5Q6PL45 260 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 DBX2Q6ZNG2 339 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 MARS2Q96GW9 593 aaKnown RBP13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 REEP6Q96HR9 211 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 SRXN1Q9BYN0 137 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 DKKL1Q9UK85 242 aa13.19□□□□□ -0.3
LYSMD4-204ENST00000409796 LOC102723996A0A087X1L8 192 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 ZNF728P0DKX0 622 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 SUCLG1P53597 346 aaKnown RBP13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 DVL1P1P54792 670 aaPredicted RBP13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 TMEM187Q14656 261 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 SPSB1Q96BD6 273 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 NAA60Q9H7X0 242 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 NECAP2Q9NVZ3 263 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 NXT1Q9UKK6 140 aaKnown RBP13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 IGHV1-45A0A0A0MS14 117 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 STARD6P59095 220 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 FXYD4P59646 89 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 MRPS34P82930 218 aaKnown RBP13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 FAM3AP98173 230 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 TSPO2Q5TGU0 170 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 NAXEQ8NCW5 288 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 SECTM1Q8WVN6 248 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 DUSP23Q9BVJ7 150 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 PLEKHA2Q9HB19 425 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 HSF4Q9ULV5 492 aa13.18□□□□□ -0.3
LYSMD4-204ENST00000409796 FAM221AA4D161 298 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 SYNGR3O43761 229 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 CLN5O75503 358 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 CHATP28329 748 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 RAB35Q15286 201 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 UBAC2Q8NBM4 344 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 LYPD6BQ8NI32 183 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 RTN4IP1Q8WWV3 396 aaPredicted RBP13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 METTL1Q9UBP6 276 aaKnown RBP13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 KCNIP3Q9Y2W7 256 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 SHANK1Q9Y566 2161 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 K7ESF4 209 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 DIRAS3O95661 229 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 UMODP07911 640 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 GLI4P10075 376 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 DTYMKP23919 212 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 ABCA11PQ4W5N1 156 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 PHLDA2Q53GA4 152 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 LYZL2Q7Z4W2 148 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 IMMP1LQ96LU5 166 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 CACFD1Q9UGQ2 172 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 POMT1Q9Y6A1 747 aa13.17□□□□□ -0.3
LYSMD4-204ENST00000409796 E5RGE8 158 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 XRCC2O43543 280 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 PATE4P0C8F1 98 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 COX6A1P12074 109 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 PAX6P26367 422 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 RNF212Q495C1 297 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 C15orf54Q8N8G6 183 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
LYSMD4-204ENST00000409796 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms