RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PRR31Q5SQ13 230 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 GDPGP1Q6ZNW5 385 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 C11orf42Q8N5U0 333 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 OR4M1Q8NGD0 313 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 FGGYQ96C11 551 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 C4orf36Q96KX1 117 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 ZNF696Q9H7X3 374 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 FAM118AQ9NWS6 357 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 HHLA2Q9UM44 414 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 PKD1L1Q8TDX9 2849 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 IGKV1-9A0A0C4DH69 117 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 hCG_1809904A0A1W2PP81 198 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 A0A1W2PPE2 198 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 A0A1W2PR64 198 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 A0A1W2PRV1 198 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 CLPSL1A2RUU4 121 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 BTBD17A6NE02 478 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 OR4C45A6NMZ5 311 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 FADS2O95864 444 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 ZNF20P17024 532 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 ATF1P18846 271 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 PRKACBP22694 351 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 MTCP1P56278 107 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 COL10A1Q03692 680 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 MKXQ8IYA7 352 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 Q8IYB0 196 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 SYS1Q8N2H4 156 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 ALG8Q9BVK2 526 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 HEXA-AS1Q9H8Q6 139 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 SEBOXQ9HB31 216 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 INPP5EQ9NRR6 644 aa16.01■□□□□ 0.15
TSPAN4-209ENST00000409543 ANGPTL7O43827 346 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 ZNF737O75373 536 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 IGHA1P01876 353 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 RAB40BQ12829 278 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 ALKBH1Q13686 389 aaKnown RBP16■□□□□ 0.15
TSPAN4-209ENST00000409543 OLFML2AQ68BL7 652 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 LHFPL3Q86UP9 236 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 ASCC1Q8N9N2 400 aaKnown RBP16■□□□□ 0.15
TSPAN4-209ENST00000409543 BEND2Q8NDZ0 799 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 SPSB1Q96BD6 273 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 AMBNQ9NP70 447 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 MRPS18AQ9NVS2 196 aaKnown RBP16■□□□□ 0.15
TSPAN4-209ENST00000409543 VPREB3Q9UKI3 123 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 MYRFQ9Y2G1 1151 aa16■□□□□ 0.15
TSPAN4-209ENST00000409543 INMTO95050 263 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 BAG2O95816 211 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 CYB5AP00167 134 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 RPSAP08865 295 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 CCL3L1P16619 93 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 AZGP1P25311 298 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 LHFPL2Q6ZUX7 228 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 ZNF676Q8N7Q3 588 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 OR51A4Q8NGJ6 313 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 OR10AC1Q8NH08 325 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 OR5R1Q8NH85 324 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 WFDC12Q8WWY7 111 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 EMG1Q92979 244 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 SNX22Q96L94 193 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 ZNF649Q9BS31 505 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 ISG20L2Q9H9L3 353 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 ERVK13-1Q9NX77 482 aa15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 RPL36Q9Y3U8 105 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-209ENST00000409543 TRBV2A0A0J9YWF9 115 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 MT-ND2P03891 347 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 ERVFRD-1P60508 538 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 MRPL28Q13084 256 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 ZNF273Q14593 569 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 C17orf107Q6ZR85 190 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 GDPD3Q7L5L3 318 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 OR8H2Q8N162 312 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 ZSCAN4Q8NAM6 433 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 OR13C3Q8NGS6 347 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 AJUBAQ96IF1 538 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 RDH12Q96NR8 316 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 OPALINQ96PE5 141 aa15.98■□□□□ 0.15
TSPAN4-209ENST00000409543 C17orf98A8MV24 154 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 HAND1O96004 215 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 OCM2P0CE71 109 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 OCMP0CE72 109 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 PIPP12273 146 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 BCL3P20749 454 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 NPBWR2P48146 333 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 POU3F4P49335 361 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 DLX6P56179 175 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 PDZK1IP1Q13113 114 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 ZSCAN26Q16670 478 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 KLHL22Q53GT1 634 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 LPCAT4Q643R3 524 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 FAM58AQ8N1B3 248 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 OR52I1Q8NGK6 324 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 LINC01006Q8NI28 216 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 C17orf50Q8WW18 174 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 APH1BQ8WW43 257 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 STMN2Q93045 179 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 MEGF9Q9H1U4 602 aa15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 RBFOX1Q9NWB1 397 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 SMPD3Q9NY59 655 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-209ENST00000409543 TMEM82A0PJX8 343 aa15.96■□□□□ 0.15
TSPAN4-209ENST00000409543 RBP4P02753 201 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms