RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 OR13G1Q8NGZ3 307 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 C5orf66Q9H5L9 145 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 SEBOXQ9HB31 216 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 BARX1Q9HBU1 254 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 TIMM10BQ9Y5J6 103 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 CSAG2Q9Y5P2 127 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 TRBV23-1A0A0A0MS06 115 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 hCG_38984A0A1B0GV85 526 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 MRPL33O75394 65 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 HLA-HP01893 362 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 AMY2BP19961 511 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 IL13RA1P78552 427 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 FAM3AP98173 230 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 FAM76BQ5HYJ3 339 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 MOB3CQ70IA8 216 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 RELL2Q8NC24 303 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM185AQ8NFB2 350 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 OCSTAMPQ9BR26 566 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 UFSP2Q9NUQ7 469 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 IGKV3D-15A0A087WSY6 115 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 KCNAB3O43448 404 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 MPGP29372 298 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 MEOX1P50221 254 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 SNU13P55769 128 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 PLGLB1Q02325 96 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 EIF3IQ13347 325 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 BRICD5Q6PL45 260 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 KCTD9Q7L273 389 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 EDARADDQ8WWZ3 215 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 Q96M66 194 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 TM2D1Q9BX74 207 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF701Q9NV72 531 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 B4GALT7Q9UBV7 327 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 ARHGAP21Q5T5U3 1957 aa13.16□□□□□ -0.3
SCAMP4-202ENST00000409472 FOLR2P14207 255 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 AIMP2Q13155 320 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 TAF9Q16594 264 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 PNLIPRP3Q17RR3 467 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 AADACL3Q5VUY0 350 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 RBMS3Q6XE24 437 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 RXFP4Q8TDU9 374 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 S100A13Q99584 98 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 CNOT1A5YKK6 2376 aaKnown RBP13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 ARGFXA6NJG6 315 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 FIGNL2A6NMB9 653 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF205O95201 554 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 SPINK2P20155 84 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 ATP1B3P54709 279 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 PDCD1Q15116 288 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 PIGYQ3MUY2 71 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 VAX1Q5SQQ9 334 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 TMPRSS7Q7RTY8 843 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 MDS2Q8NDY4 140 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 CSNK2A3Q8NEV1 391 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 OR5H2Q8NGV7 314 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 TERB2Q8NHR7 220 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 MFFQ9GZY8 342 aa13.15□□□□□ -0.3
SCAMP4-202ENST00000409472 C5orf52A6NGY3 159 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 OR5H14A6NHG9 310 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 RFPL4AA6NLU0 287 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 DHRS7CA6NNS2 312 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 RFPL4AL1F8VTS6 287 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 TBPP20226 339 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 CCNOP22674 350 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 CPT2P23786 658 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 PDZK1IP1Q13113 114 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 EIF2S3LQ2VIR3 472 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 TMEM42Q69YG0 159 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 VASH2Q86V25 355 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 WDR13Q9H1Z4 485 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 ABI3Q9P2A4 366 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 GHRLQ9UBU3 117 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 CARHSP1Q9Y2V2 147 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 DMRT1Q9Y5R6 373 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 NME2P1O60361 137 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 CD8AP01732 235 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 SP1P08047 785 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 NME2P22392 152 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 DEFA6Q01524 100 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 SLC9A3R2Q15599 337 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 TRIP6Q15654 476 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 BEX5Q5H9J7 111 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 NUFIP2Q7Z417 695 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 ZNF565Q8N9K5 539 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 PPP1R1CQ8WVI7 109 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 SPSB1Q96BD6 273 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 CDC6Q99741 560 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 FAAP24Q9BTP7 215 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 PRRG4Q9BZD6 226 aa13.14□□□□□ -0.31
SCAMP4-202ENST00000409472 PARD6AQ9NPB6 346 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms