RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RHOFQ9HBH0 211 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 RNF114Q9Y508 228 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 hADV38S2A0JD32 116 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 IRGMA1A4Y4 181 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 H3BNX3 289 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 K7N7A8 449 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 OMGP23515 440 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 PEX2P28328 305 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 MTCP1P56278 107 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF85Q03923 595 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 MEF2CQ06413 473 aaPredicted RBP7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 RAB40BQ12829 278 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 KLRD1Q13241 179 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 LRRC75BQ2VPJ9 315 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ZBTB49Q6ZSB9 765 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 SLC25A26Q70HW3 274 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ANGPTL5Q86XS5 388 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 OR8H2Q8N162 312 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 PRSS35Q8N3Z0 413 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 CD177Q8N6Q3 437 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF676Q8N7Q3 588 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF555Q8NEP9 628 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 OR4C13Q8NGP0 309 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 EMG1Q92979 244 aaKnown RBP7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 SNX22Q96L94 193 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF488Q96MN9 340 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 OPALINQ96PE5 141 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 MBOAT4Q96T53 435 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 COMMD4Q9H0A8 199 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 C16orf95Q9H693 158 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 RANBP3Q9H6Z4 567 aaPredicted RBP7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 ELL3Q9HB65 397 aaPredicted RBP7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 C8orf4Q9NR00 106 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 C19orf12Q9NSK7 152 aa7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 RPL36Q9Y3U8 105 aaKnown RBP7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
SNORD88A-201ENST00000408314 TRBV2A0A0J9YWF9 115 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 A0A1W2PRD5 423 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 A0A1W2PRF3 423 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 A0A1W2PRM7 423 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 A6NIN4 97 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 TMEM212A6NML5 194 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 J3QLW9 94 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 MGST3O14880 152 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 CLPXO76031 633 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 HAND1O96004 215 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 MT-ND2P03891 347 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF728P0DKX0 622 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 DBTP11182 482 aaKnown RBP7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF19P17023 458 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ATF1P18846 271 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 AZGP1P25311 298 aaKnown RBP7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 KIR3DL2P43630 455 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 POU3F4P49335 361 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 BMXP51813 675 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 GBX2P52951 348 aaPredicted RBP7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 EDDM3BP56851 147 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 COL10A1Q03692 680 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF91Q05481 1191 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 MED21Q13503 144 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ALKBH1Q13686 389 aaKnown RBP7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 GALEQ14376 348 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 UBE2V2Q15819 145 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ZSCAN26Q16670 478 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ZIK1Q3SY52 487 aaPredicted RBP7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 KLHL22Q53GT1 634 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 DMRTC1Q5HYR2 192 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 TMEM200BQ69YZ2 307 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 FAM58AQ8N1B3 248 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 PQLC1Q8N2U9 271 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 OR13C3Q8NGS6 347 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 SLAMF9Q96A28 289 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF714Q96N38 554 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ALG8Q9BVK2 526 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 CDCA4Q9BXL8 241 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 S100A14Q9HCY8 104 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 ABCB10Q9NRK6 738 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 EXOGQ9Y2C4 368 aaKnown RBP7.42□□□□□ -1.22
SNORD88A-201ENST00000408314 C17orf98A8MV24 154 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 H3BUX3 64 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 J3QRE1 110 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 SH2D1BO14796 132 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 MAGEB3O15480 346 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNF737O75373 536 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 TSPAN9O75954 239 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 ALX3O95076 343 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 IGHA1P01876 353 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 TFF1P04155 84 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 CD2P06729 351 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 GABRA5P31644 462 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 CEBPDP49716 269 aaPredicted RBP7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 ARHGDIBP52566 201 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 OR12D2P58182 307 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 RELBQ01201 579 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 GRK1Q15835 563 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 TAF9Q16594 264 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 SAXO1Q8IYX7 474 aa7.41□□□□□ -1.22
SNORD88A-201ENST00000408314 PNKDQ8N490 385 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms