RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 LIMS3P0CW19 117 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 LIMS4P0CW20 117 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 PRKACBP22694 351 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 MPZP25189 248 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 AZGP1P25311 298 aaKnown RBP8.51□□□□□ -1.05
FAM49A-202ENST00000406434 DCKP27707 260 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 CAPGP40121 348 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 RBP2P50120 134 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 ETV1P50549 477 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
FAM49A-202ENST00000406434 CAV3P56539 151 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 BPIFB3P59826 476 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 BLMHQ13867 455 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 OGFRL1Q5TC84 451 aaPredicted RBP8.51□□□□□ -1.05
FAM49A-202ENST00000406434 TMPRSS11AQ6ZMR5 421 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 C9orf139Q6ZV77 190 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 MKXQ8IYA7 352 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 ZNF561Q8N587 486 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 OR4M1Q8NGD0 313 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 SDSLQ96GA7 329 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 SPACA5Q96QH8 159 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 LIN7BQ9HAP6 207 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 CHCHD3Q9NX63 227 aaKnown RBP8.51□□□□□ -1.05
FAM49A-202ENST00000406434 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
FAM49A-202ENST00000406434 STAB1Q9NY15 2570 aa8.51□□□□□ -1.05
FAM49A-202ENST00000406434 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 TMEM212A6NML5 194 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 H0YAE9 185 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 SPRY1O43609 319 aaPredicted RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 ZFPL1O95159 310 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 CCDC159P0C7I6 412 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 MYL12AP19105 171 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 PRTN3P24158 256 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 DUSP1P28562 367 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 SOX2P48431 317 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 SNU13P55769 128 aaKnown RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 COL10A1Q03692 680 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 MRPL28Q13084 256 aaKnown RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 KLRD1Q13241 179 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 SLC9A3R2Q15599 337 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 OR2G6Q5TZ20 316 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 UTS2BQ765I0 119 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 C8orf59Q8N0T1 100 aaPredicted RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 ASCC1Q8N9N2 400 aaKnown RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 DNAAF1Q8NEP3 725 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 OR13C9Q8NGT0 318 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 TSEN15Q8WW01 171 aaKnown RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 GGHQ92820 318 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 EMG1Q92979 244 aaKnown RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 SLC25A28Q96A46 364 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 TMEM80Q96HE8 168 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 C1orf147Q96MC9 270 aaPredicted RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 OPALINQ96PE5 141 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 VCXQ9H320 206 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 ZCCHC4Q9H5U6 513 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 DCLRE1BQ9H816 532 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 NEK6Q9HC98 313 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 HES4Q9HCC6 221 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 CLEC2DQ9UHP7 191 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 DHDHQ9UQ10 334 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 CAB39Q9Y376 341 aaPredicted RBP8.5□□□□□ -1.05
FAM49A-202ENST00000406434 FAM96BQ9Y3D0 163 aa8.5□□□□□ -1.05
FAM49A-202ENST00000406434 TMEM238LA0A1B0GVL6 79 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 TMEM89A2RUT3 159 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 HOXA3O43365 443 aaPredicted RBP8.49□□□□□ -1.05
FAM49A-202ENST00000406434 ANGPTL7O43827 346 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 KNG1P01042 644 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 TK1P04183 234 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 CHRM2P08172 466 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 HCKP08631 526 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
FAM49A-202ENST00000406434 GNAO1P09471 354 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 PIPP12273 146 aaPredicted RBP8.49□□□□□ -1.05
FAM49A-202ENST00000406434 BCL3P20749 454 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 EEF1B2P24534 225 aaKnown RBP8.49□□□□□ -1.05
FAM49A-202ENST00000406434 NPBWR2P48146 333 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 RPL31P62899 125 aaKnown RBP8.49□□□□□ -1.05
FAM49A-202ENST00000406434 PDZK1IP1Q13113 114 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 MED21Q13503 144 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 Q6YL49 198 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 LHFPL2Q6ZUX7 228 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 RNF144BQ7Z419 303 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 SATL1Q86VE3 508 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 SERPINA12Q8IW75 414 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 Q8N7P7 452 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 BPIFB6Q8NFQ5 453 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 OR5D18Q8NGL1 313 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 OR5D14Q8NGL3 314 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 C8orf46Q8TAG6 207 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 C19orf12Q9NSK7 152 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 BABAM2Q9NXR7 383 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 EXOSC1Q9Y3B2 195 aaKnown RBP8.49□□□□□ -1.05
FAM49A-202ENST00000406434 DNHD1Q96M86 4753 aa8.49□□□□□ -1.05
FAM49A-202ENST00000406434 TRBV23-1A0A0A0MS06 115 aa8.48□□□□□ -1.05
FAM49A-202ENST00000406434 A0A0U1RQK1 487 aa8.48□□□□□ -1.05
FAM49A-202ENST00000406434 MEX3AA1L020 520 aaKnown RBP8.48□□□□□ -1.05
FAM49A-202ENST00000406434 M0R1W7 72 aa8.48□□□□□ -1.05
FAM49A-202ENST00000406434 CASQ2O14958 399 aaPredicted RBP8.48□□□□□ -1.05
FAM49A-202ENST00000406434 TMEM225BP0DP42 221 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms