RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 GSKIPQ9P0R6 139 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 C14orf166Q9Y224 244 aaKnown RBP13.67□□□□□ -0.22
TOM1-203ENST00000404284 A0A0J9YW62 118 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 A6NLC8 198 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 NUDT19A8MXV4 375 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 IFNA2P01563 188 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 CRYGSP22914 178 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 NUBP1P53384 320 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 RTL6Q6ICC9 239 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 NRIP2Q9BQI9 281 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 ZNF2Q9BSG1 426 aaPredicted RBP13.67□□□□□ -0.22
TOM1-203ENST00000404284 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 OR2S2Q9NQN1 319 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 GPR173Q9NS66 373 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 RCC2Q9P258 522 aaKnown RBP13.67□□□□□ -0.22
TOM1-203ENST00000404284 DKKL1Q9UK85 242 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 HS3ST3B1Q9Y662 390 aa13.67□□□□□ -0.22
TOM1-203ENST00000404284 AP4M1O00189 453 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 TNFSF11O14788 317 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
TOM1-203ENST00000404284 ZNF708P17019 499 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 MRPS34P82930 218 aaKnown RBP13.66□□□□□ -0.22
TOM1-203ENST00000404284 HGFACQ04756 655 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 HLA-BQ31612 363 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 RPUSD3Q6P087 351 aaKnown RBP13.66□□□□□ -0.22
TOM1-203ENST00000404284 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 CCDC54Q8NEL0 328 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 SPTSSAQ969W0 71 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 S100PBPQ96BU1 408 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 JSRP1Q96MG2 331 aaPredicted RBP13.66□□□□□ -0.22
TOM1-203ENST00000404284 PLEKHJ1Q9NW61 149 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 PTRH2Q9Y3E5 179 aaKnown RBP13.66□□□□□ -0.22
TOM1-203ENST00000404284 SERPINA5P05154 406 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 SFTPBP07988 381 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 HKR1P10072 659 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 SPEM2Q0P670 501 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 EXT1Q16394 746 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 FAM27BQ5VT28 67 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 IL34Q6ZMJ4 242 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 GALNTL5Q7Z4T8 443 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 SULF2Q8IWU5 870 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 OR2AE1Q8NHA4 323 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 NAT6Q93015 286 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 CPNE4Q96A23 557 aaPredicted RBP13.66□□□□□ -0.22
TOM1-203ENST00000404284 DECR2Q9NUI1 292 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 C1orf123Q9NWV4 160 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 ZNF581Q9P0T4 197 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 SDK2Q58EX2 2172 aa13.66□□□□□ -0.22
TOM1-203ENST00000404284 RBMXP38159 391 aaKnown RBP13.65□□□□□ -0.22
TOM1-203ENST00000404284 RBP2P50120 134 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 SSR4P51571 173 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 PJVKQ0ZLH3 352 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 IL11RAQ14626 422 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 RPL7L1Q6DKI1 246 aaKnown RBP13.65□□□□□ -0.22
TOM1-203ENST00000404284 SMIM8Q96KF7 97 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 RPS10P5Q9NQ39 176 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 MEMO1Q9Y316 297 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 hCG_1809904A0A1W2PP81 198 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 A0A1W2PR64 198 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 A0A1W2PRV1 198 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 CTSDP07339 412 aaPredicted RBP13.65□□□□□ -0.22
TOM1-203ENST00000404284 ECI1P42126 302 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 IAH1Q2TAA2 248 aaPredicted RBP13.65□□□□□ -0.22
TOM1-203ENST00000404284 RNASE11Q8TAA1 199 aaKnown RBP13.65□□□□□ -0.22
TOM1-203ENST00000404284 IFI44Q8TCB0 444 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 CNTNAP3Q9BZ76 1288 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 LIME1Q9H400 295 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 ANXA10Q9UJ72 324 aa13.65□□□□□ -0.22
TOM1-203ENST00000404284 TNRC6BQ9UPQ9 1833 aaKnown RBP13.65□□□□□ -0.22
TOM1-203ENST00000404284 IGKV1-27A0A075B6S5 117 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 CRYM-AS1A6NIL9 109 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 SYNGR3O43761 229 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 ANGPTL7O43827 346 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 YIF1AO95070 293 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 MT-ND4LP03901 98 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 TMEM225BP0DP42 221 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 MTCP1P56278 107 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 RAC1P63000 192 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 OR2A2Q6IF42 318 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 ADAM5Q6NVV9 412 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 FOXRED2Q8IWF2 684 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 M1APQ8TC57 530 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 MR1Q95460 341 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 SPSB1Q96BD6 273 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 SAT2Q96F10 170 aaPredicted RBP13.64□□□□□ -0.23
TOM1-203ENST00000404284 HRH4Q9H3N8 390 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 MASP2O00187 686 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 SPRY1O43609 319 aaPredicted RBP13.64□□□□□ -0.23
TOM1-203ENST00000404284 SFTA3P0C7M3 94 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 COX5BP10606 129 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 NTF4P34130 210 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 RAB35Q15286 201 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 PPP1R14DQ9NXH3 145 aa13.64□□□□□ -0.23
TOM1-203ENST00000404284 TAAR5O14804 337 aa13.63□□□□□ -0.23
TOM1-203ENST00000404284 TCAPO15273 167 aa13.63□□□□□ -0.23
TOM1-203ENST00000404284 LRP3O75074 770 aa13.63□□□□□ -0.23
TOM1-203ENST00000404284 PRSS12P56730 875 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms