RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 COL10A1Q03692 680 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 ALKBH1Q13686 389 aaKnown RBP12.94□□□□□ -0.34
ATG4B-203ENST00000400772 ZNF273Q14593 569 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 CNN3Q15417 329 aaKnown RBP12.94□□□□□ -0.34
ATG4B-203ENST00000400772 UTS2BQ765I0 119 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 RNF144BQ7Z419 303 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 OR5D13Q8NGL4 314 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 SLITRK2Q9H156 845 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 MRPS18AQ9NVS2 196 aaKnown RBP12.94□□□□□ -0.34
ATG4B-203ENST00000400772 ERVK13-1Q9NX77 482 aa12.94□□□□□ -0.34
ATG4B-203ENST00000400772 CAB39Q9Y376 341 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-203ENST00000400772 E9PI62 339 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 CHRM2P08172 466 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 FBP1P09467 338 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 CCL3L1P16619 93 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 AZGP1P25311 298 aaKnown RBP12.93□□□□□ -0.34
ATG4B-203ENST00000400772 NPBWR2P48146 333 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 RBP2P50120 134 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 DLX6P56179 175 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 RPL15P61313 204 aaKnown RBP12.93□□□□□ -0.34
ATG4B-203ENST00000400772 ACTA2P62736 377 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 ACTG2P63267 376 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 ACSM1Q08AH1 577 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 RAB40BQ12829 278 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 CRIP3Q6Q6R5 217 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 EGFL6Q8IUX8 553 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 SYS1Q8N2H4 156 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 Q96MT0 163 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 DPAGT1Q9H3H5 408 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 IL36RNQ9UBH0 155 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 HHLA2Q9UM44 414 aa12.93□□□□□ -0.34
ATG4B-203ENST00000400772 SF3B6Q9Y3B4 125 aaKnown RBP12.93□□□□□ -0.34
ATG4B-203ENST00000400772 TMEM82A0PJX8 343 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 WBP4O75554 376 aaKnown RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 FADS2O95864 444 aaKnown RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 BCL3P20749 454 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 ATP1B3P54709 279 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 MTCP1P56278 107 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 SRSF4Q08170 494 aaKnown RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 SMN1Q16637 294 aaKnown RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 PRR31Q5SQ13 230 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 OR52I1Q8NGK6 324 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 OR4F5Q8NH21 305 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 SEBOXQ9HB31 216 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 BEX1Q9HBH7 125 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 INPP5EQ9NRR6 644 aa12.92□□□□□ -0.34
ATG4B-203ENST00000400772 RBFOX1Q9NWB1 397 aaKnown RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 RPL36Q9Y3U8 105 aaKnown RBP12.92□□□□□ -0.34
ATG4B-203ENST00000400772 NBEAL1Q6ZS30 2694 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 IGKV1-12A0A0C4DH73 117 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 A0A1B0GUS0 222 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 CLPSL1A2RUU4 121 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 SPRY1O43609 319 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-203ENST00000400772 ANGPTL7O43827 346 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 IGKV1D-12P01611 117 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 CALCBP10092 127 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 PIPP12273 146 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-203ENST00000400772 ZNF20P17024 532 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 PRKACBP22694 351 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 POU3F4P49335 361 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 PDZK1IP1Q13113 114 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 MIDNQ504T8 468 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 OLFML2AQ68BL7 652 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 C17orf107Q6ZR85 190 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 LHFPL2Q6ZUX7 228 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 ZNF676Q8N7Q3 588 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 ASCC1Q8N9N2 400 aaKnown RBP12.91□□□□□ -0.34
ATG4B-203ENST00000400772 BEND2Q8NDZ0 799 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 OR52N4Q8NGI2 321 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 OR13C3Q8NGS6 347 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 EMG1Q92979 244 aaKnown RBP12.91□□□□□ -0.34
ATG4B-203ENST00000400772 SPSB1Q96BD6 273 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 SNX22Q96L94 193 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 OPALINQ96PE5 141 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 ZNF696Q9H7X3 374 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 SMPD3Q9NY59 655 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-203ENST00000400772 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
ATG4B-203ENST00000400772 TRBV2A0A0J9YWF9 115 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 A0A1W2PPH5 198 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 MEX3AA1L020 520 aaKnown RBP12.9□□□□□ -0.34
ATG4B-203ENST00000400772 ZFPL1O95159 310 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 CLIC3O95833 236 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 HAND1O96004 215 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 PAHP00439 452 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 MT-ND2P03891 347 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 LIMS3P0CW19 117 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 LIMS4P0CW20 117 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 PAX6P26367 422 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 DUSP1P28562 367 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 KRTAP10-3P60369 221 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 LPCAT4Q643R3 524 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 GDPGP1Q6ZNW5 385 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 Q6ZSV7 163 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 TCF23Q7RTU1 214 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 Q8IYB0 196 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 OR8H2Q8N162 312 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 FAM58AQ8N1B3 248 aa12.9□□□□□ -0.34
ATG4B-203ENST00000400772 ZSCAN4Q8NAM6 433 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms