RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 HLA-HP01893 362 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF708P17019 499 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 GNMTQ14749 295 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 TRIM61Q5EBN2 209 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 SPINK14Q6IE38 97 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 RDH5Q92781 318 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF107Q9UII5 783 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 A0A1W2PNV4 684 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 GPR37O15354 613 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 IGSF11Q5DX21 431 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 SLC23A3Q6PIS1 610 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF695Q8IW36 515 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 IQCF2Q8IXL9 164 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 OR1F12Q8NHA8 337 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 ASB13Q8WXK3 278 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 RSRP1Q9BUV0 290 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 CHST5Q9GZS9 411 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 PRDM6Q9NQX0 595 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 MMP26Q9NRE1 261 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 NECAP2Q9NVZ3 263 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 HS3ST3B1Q9Y662 390 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 FAM24AA6NFZ4 105 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 TXNL1O43396 289 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 GLAP06280 429 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 CLDN15P56746 228 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 SNRPEP62304 92 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 C3AR1Q16581 482 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 FGFBP3Q8TAT2 258 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 PP6455Q8WZ26 134 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 CHRNA10Q9GZZ6 450 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 SH3BGRL3Q9H299 93 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 MYOZ1Q9NP98 299 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 TMEM131Q92545 1883 aa11.04□□□□□ -0.64
PPP4R1-202ENST00000400555 CDRT15L2A8MXV6 281 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 RD3LP0DJH9 198 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 HKR1P10072 659 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 NPBWR2P48146 333 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 ZFP62Q8NB50 900 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 OR52M1Q8NGK5 317 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 OR51H1Q8NH63 302 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 KIRREL1Q96J84 757 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 CLCC1Q96S66 551 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 NRIP2Q9BQI9 281 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 RAB19A4D1S5 217 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 LIFP15018 202 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF44P15621 663 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF92Q03936 586 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 CNN3Q15417 329 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 SPATA46Q5T0L3 261 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 AVPI1Q5T686 147 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 RPUSD3Q6P087 351 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 LYPD6Q86Y78 171 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 MARS2Q96GW9 593 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF286AQ9HBT8 521 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 PLA2G3Q9NZ20 509 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 OSGIN2Q9Y236 505 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 SSSCA1O60232 199 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 ZIC3O60481 467 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 APOC1P02654 83 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 HAAOP46952 286 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 F2RL1P55085 397 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 DSCR4P56555 118 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 POLR2GP62487 172 aaKnown RBP eCLIP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 FLI1Q01543 452 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 HAGHQ16775 308 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 OSR2Q8N2R0 312 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 OR10D3Q8NH80 312 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 DNASE2BQ8WZ79 361 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 TCEAL3Q969E4 200 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 SGCZQ96LD1 299 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 FOXB1Q99853 325 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 ZFP57Q9NU63 452 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 PRELID3BQ9Y3B1 194 aa11.03□□□□□ -0.64
PPP4R1-202ENST00000400555 C5orf49A4QMS7 147 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 MRPL33O75394 65 aaKnown RBP11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 GPM6AP51674 278 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 POC1AQ8NBT0 407 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 SLC30A7Q8NEW0 376 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 NAT6Q93015 286 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF488Q96MN9 340 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 HIST1H2AAQ96QV6 131 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 C12orf49Q9H741 205 aa11.02□□□□□ -0.64
PPP4R1-202ENST00000400555 C9JQL5 133 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 HSPA12AO43301 675 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 S100A9P06702 114 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 IZUMO4Q1ZYL8 232 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 FIGNL2A6NMB9 653 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 MBPP02686 304 aaPredicted RBP11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 AADACP22760 399 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 PLGLB1Q02325 96 aa11.02□□□□□ -0.65
PPP4R1-202ENST00000400555 TSC22D1Q15714 1073 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms