RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 LRRC75AQ8NAA5 344 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 CCL19Q99731 98 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 RASL11BQ9BPW5 248 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 GON7Q9BXV9 100 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 INPP5EQ9NRR6 644 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 A4GNTQ9UNA3 340 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 DIMT1Q9UNQ2 313 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 OR2W1Q9Y3N9 320 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 HSPE1-MOB4S4R3N1 261 aa9.97□□□□□ -0.81
CACNA1C-217ENST00000399641 SELENBP1Q13228 472 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 LRRC61Q9BV99 259 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 PIPOXQ9P0Z9 390 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 P01737 135 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 SAA1P0DJI8 122 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 CDAP32320 146 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 PPP1CAP62136 330 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 SNRPGP62308 76 aaKnown RBP9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 TOMM34Q15785 309 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 ACSM5Q6NUN0 579 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 TMEM183AQ8IXX5 376 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 PHLDA1Q8WV24 401 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 NUDCD2Q8WVJ2 157 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 S1PR5Q9H228 398 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 TAAR3PQ9P1P4 343 aa9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 CHD2O14647 1828 aaKnown RBP9.96□□□□□ -0.81
CACNA1C-217ENST00000399641 C4BP0C0L5 1744 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 A0A087X0M5 115 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 A0A1B0GX30 115 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 UBL3O95164 117 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 IGHV4-39P01824 125 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 EPHA8P29322 1005 aaPredicted RBP9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 Q499Y3 187 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 FAM24BQ8N5W8 94 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 RNASEH2CQ8TDP1 164 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 KCNK15Q9H427 330 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 MTCH2Q9Y6C9 303 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 ZNF142P52746 1687 aaPredicted RBP9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 C7orf71A4D174 169 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 SNNO75324 88 aaPredicted RBP9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 COL9A1P20849 921 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 RELBQ01201 579 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 RFESDQ8TAC1 157 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 CD37P11049 281 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 ZNF691Q5VV52 312 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 TCTN3Q6NUS6 607 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 OR52I1Q8NGK6 324 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 TEAD3Q99594 435 aa9.96□□□□□ -0.82
CACNA1C-217ENST00000399641 APCSP02743 223 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 LIPAP38571 399 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 RPS19P39019 145 aaKnown RBP9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 CEACAM3P40198 252 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 MEOX2P50222 304 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 PRB3Q04118 309 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 OR2W3Q7Z3T1 314 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 HDHD3Q9BSH5 251 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 PIMREGQ9BSJ6 248 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 SEC11CQ9BY50 192 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 YAE1D1Q9NRH1 226 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 LTN1O94822 1766 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 HMX2A2RU54 273 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 NPBWR2P48146 333 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 GPNMBQ14956 572 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 LRRC15Q8TF66 581 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 CLDN23Q96B33 292 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 TARM1B6A8C7 271 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 H0YIG0 161 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 SLC25A17O43808 307 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 JTBO76095 146 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 LIM2P55344 173 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 LOXL3P58215 753 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 HBA1P69905 142 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 SLC35B1P78383 322 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 MICBQ29980 383 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 ZNF880Q6PDB4 577 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 OR13F1Q8NGS4 319 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 OR52I2Q8NH67 350 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 CCL4L1Q8NHW4 92 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 RGP1Q92546 391 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 IGSF5Q9NSI5 407 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 CHST2Q9Y4C5 530 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 MFSD2BA6NFX1 497 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 HAND1O96004 215 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 CYC1P08574 325 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 PSG6Q00889 435 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 JOSD1Q15040 202 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 MBOAT2Q6ZWT7 520 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 MRGPRDQ8TDS7 321 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 EID2BQ96D98 161 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 RASL12Q9NYN1 266 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 SELENOTP62341 195 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 MCHR2Q969V1 340 aa9.95□□□□□ -0.82
CACNA1C-217ENST00000399641 KIR2DS1A0A191URI9 304 aa9.94□□□□□ -0.82
CACNA1C-217ENST00000399641 KIR3DL2P43630 455 aa9.94□□□□□ -0.82
CACNA1C-217ENST00000399641 KIR2DS4P43632 304 aa9.94□□□□□ -0.82
CACNA1C-217ENST00000399641 KIR2DS1Q14954 304 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms