RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ABHD3Q8WU67 409 aa20■□□□□ 0.79
RABGGTA-202ENST00000399409 PIGCQ92535 297 aa20■□□□□ 0.79
RABGGTA-202ENST00000399409 ZNF845Q96IR2 970 aaPredicted RBP20■□□□□ 0.79
RABGGTA-202ENST00000399409 DDA1Q9BW61 102 aa20■□□□□ 0.79
RABGGTA-202ENST00000399409 SUCNR1Q9BXA5 334 aa20■□□□□ 0.79
RABGGTA-202ENST00000399409 LIME1Q9H400 295 aa20■□□□□ 0.79
RABGGTA-202ENST00000399409 OR2S2Q9NQN1 319 aa20■□□□□ 0.79
RABGGTA-202ENST00000399409 NOSIPQ9Y314 301 aaKnown RBP20■□□□□ 0.79
RABGGTA-202ENST00000399409 K7EPK0 472 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 NUPL2O15504 423 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 RPL12P30050 165 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 PABPC1L2AQ5JQF8 200 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM71E2Q8N5Q1 922 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 OR5T2Q8NGG2 359 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 TSNAXQ99598 290 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM173AQ9BQD7 235 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 ZNF629Q9UEG4 869 aaPredicted RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 COL27A1Q8IZC6 1860 aaPredicted RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 TOR1AO14656 332 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 CST4P01036 141 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 GAPDHP04406 335 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 UCP3P55916 312 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 PJVKQ0ZLH3 352 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 TMEM211Q6ICI0 200 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 LRTM2Q8N967 370 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 SLC39A7Q92504 469 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 MRPL24Q96A35 216 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 SMIM8Q96KF7 97 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 PRRX2Q99811 253 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 PLEKHA2Q9HB19 425 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 TAF9BQ9HBM6 251 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 ZNF581Q9P0T4 197 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 LRFN1Q9P244 771 aa19.99■□□□□ 0.79
RABGGTA-202ENST00000399409 MRPL33O75394 65 aaKnown RBP19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 ACTL6AO96019 429 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 EDN3P14138 238 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 PRSS12P56730 875 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 RBM11P57052 281 aaKnown RBP19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 TMEM187Q14656 261 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 MST1LQ2TV78 715 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 C10orf91Q5T1B1 145 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 SLC22A25Q6T423 547 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 DBX2Q6ZNG2 339 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 COLCA1Q6ZS62 124 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 RAB11FIP2Q7L804 512 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 TOMM40LQ969M1 308 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 PARPBPQ9NWS1 579 aa19.98■□□□□ 0.79
RABGGTA-202ENST00000399409 ABCD4O14678 606 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 SIGLEC5O15389 551 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 SIGLEC14Q08ET2 396 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 RPL7L1Q6DKI1 246 aaKnown RBP19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 FOXRED2Q8IWF2 684 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 THOC3Q96J01 351 aaKnown RBP19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 ZFP57Q9NU63 452 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 B4GALT7Q9UBV7 327 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 RTTNQ86VV8 2226 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 FUT3P21217 361 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 TSPO2Q5TGU0 170 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 RTN4IP1Q8WWV3 396 aaPredicted RBP19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 GUCD1Q96NT3 240 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 SYT3Q9BQG1 590 aa19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 COLQQ9Y215 455 aaPredicted RBP19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 CARHSP1Q9Y2V2 147 aaKnown RBP19.97■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A10PA6NDY2 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A18PA6NE21 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A16PA6NEW6 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A20PA6NIJ5 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A8PA6NJQ4 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A7PA6NKC0 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A22PA8MWA6 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A12PA8MX19 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A5PA8MXJ8 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A23PA8MXZ1 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 JTBO76095 146 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A15PP0C7V4 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A13PP0C7W8 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A14PP0C7W9 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FAM90A24PP0C7X0 464 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 CTRB1P17538 263 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 FCGR2CP31995 323 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 GLP1RP43220 463 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 CTRB2Q6GPI1 263 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 CLRN3Q8NCR9 226 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 SPRY4Q9C004 299 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 SPEGQ15772 3267 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 BLOC1S1P78537 153 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 SPEM2Q0P670 501 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 ZNF169Q14929 603 aaPredicted RBP19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 CPEB3Q8NE35 698 aaKnown RBP19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 Q8NFD4 153 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 OR2M7Q8NG81 312 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 MOB3AQ96BX8 217 aa19.96■□□□□ 0.79
RABGGTA-202ENST00000399409 ARHGDIBP52566 201 aa19.95■□□□□ 0.78
RABGGTA-202ENST00000399409 TMEM268Q5VZI3 342 aa19.95■□□□□ 0.78
RABGGTA-202ENST00000399409 SPINK14Q6IE38 97 aa19.95■□□□□ 0.78
RABGGTA-202ENST00000399409 CCDC71LQ8N9Z2 235 aa19.95■□□□□ 0.78
RABGGTA-202ENST00000399409 DYRK2Q92630 601 aa19.95■□□□□ 0.78
RABGGTA-202ENST00000399409 MARS2Q96GW9 593 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-202ENST00000399409 SMOC1Q9H4F8 434 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms