RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ATF1P18846 271 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 MDKP21741 143 aaPredicted RBP12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 AZGP1P25311 298 aaKnown RBP12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 RAG2P55895 527 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 DLX1P56177 255 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 MIDNQ504T8 468 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 LHFPL2Q6ZUX7 228 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 SLC25A26Q70HW3 274 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 LHFPL3Q86UP9 236 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 MKXQ8IYA7 352 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 BATF2Q8N1L9 274 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 HAVCR2Q8TDQ0 301 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 APH1BQ8WW43 257 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 STMN2Q93045 179 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 SLAMF9Q96A28 289 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 FGGYQ96C11 551 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 ERVK13-1Q9NX77 482 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 SMPD3Q9NY59 655 aaPredicted RBP12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 C1RLQ9NZP8 487 aa12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 SF3B6Q9Y3B4 125 aaKnown RBP12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 RPL36Q9Y3U8 105 aaKnown RBP12.16□□□□□ -0.46
SMIM11A-203ENST00000399299 hCG_1809904A0A1W2PP81 198 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 A0A1W2PPE2 198 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 A0A1W2PR64 198 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 A0A1W2PRV1 198 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 MEIOCA2RUB1 952 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 F8VVB4 439 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 F8VWA3 439 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 GPR137BO60478 399 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 BAG2O95816 211 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 CYB5AP00167 134 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 MT-ND2P03891 347 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 COL10A1Q03692 680 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 PRB3Q04118 309 aaPredicted RBP12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 LPCAT4Q643R3 524 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 HCP5Q6MZN7 132 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 GDPGP1Q6ZNW5 385 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 C11orf42Q8N5U0 333 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 ZNF676Q8N7Q3 588 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 ASCC1Q8N9N2 400 aaKnown RBP12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 OR52I1Q8NGK6 324 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 OR13C3Q8NGS6 347 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 OR10AC1Q8NH08 325 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 TAF15Q92804 592 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 OPALINQ96PE5 141 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 JAM3Q9BX67 310 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 BEX1Q9HBH7 125 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 AMBNQ9NP70 447 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
SMIM11A-203ENST00000399299 TRBV2A0A0J9YWF9 115 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 TMEM212A6NML5 194 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 PAHP00439 452 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 CCDC159P0C7I6 412 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 OMGP23515 440 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 MTCP1P56278 107 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 RELBQ01201 579 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 OR8H2Q8N162 312 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF555Q8NEP9 628 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 OR51A4Q8NGJ6 313 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 OR5R1Q8NH85 324 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 EMG1Q92979 244 aaKnown RBP12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 ISG20L2Q9H9L3 353 aaKnown RBP12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 NEK6Q9HC98 313 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 VPREB3Q9UKI3 123 aa12.14□□□□□ -0.47
SMIM11A-203ENST00000399299 A0A1W2PRD5 423 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 A0A1W2PRF3 423 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 A0A1W2PRM7 423 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ANGPTL7O43827 346 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 WBP4O75554 376 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ALX3O95076 343 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 RBP4P02753 201 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 POU3F4P49335 361 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 DLX6P56179 175 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 PDZK1IP1Q13113 114 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF273Q14593 569 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF146Q15072 292 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 TAF9Q16594 264 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 FAM58AQ8N1B3 248 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 PNKDQ8N490 385 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 PACRGLQ8N7B6 248 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 BEND2Q8NDZ0 799 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 OR4M1Q8NGD0 313 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 SNX22Q96L94 193 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 COMMD4Q9H0A8 199 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ZNF696Q9H7X3 374 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-203ENST00000399299 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 CLPSL1A2RUU4 121 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 ZFPL1O95159 310 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 HAND1O96004 215 aa12.12□□□□□ -0.47
SMIM11A-203ENST00000399299 OCM2P0CE71 109 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms