RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ELOBQ15370 118 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 OR1L3Q8NH93 324 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 KLHDC7BQ96G42 594 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 ZNF700Q9H0M5 742 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 PARPBPQ9NWS1 579 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 A0A1W2PNV4 684 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 CXorf65A6NEN9 183 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 ST8SIA3O43173 380 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 ANGPTL7O43827 346 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HEXBP07686 556 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 FOSL2P15408 326 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 OMGP23515 440 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 DUSP1P28562 367 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 FASLGP48023 281 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 BLKP51451 505 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
APOB-202ENST00000399256 TAF9Q16594 264 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIKESHIQ53FT3 197 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 KIAA0895LQ68EN5 471 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 CPEB2Q7Z5Q1 589 aaKnown RBP12.2□□□□□ -0.46
APOB-202ENST00000399256 NAXEQ8NCW5 288 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 GALNT14Q96FL9 552 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 PRDM13Q9H4Q3 707 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 ZNF160Q9HCG1 818 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 AK3Q9UIJ7 227 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 PIGLQ9Y2B2 252 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 LIPGQ9Y5X9 500 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HS3ST3B1Q9Y662 390 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 ADAMTS9Q9P2N4 1935 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 A0A1B0GV90 55 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 FAM24AA6NFZ4 105 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BKO60814 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BJP06899 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BOP23527 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BBP33778 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BDP58876 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 RND3P61587 244 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BCP62807 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST2H2BEQ16778 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.2□□□□□ -0.46
APOB-202ENST00000399256 MEX3BQ6ZN04 569 aaKnown RBP12.2□□□□□ -0.46
APOB-202ENST00000399256 LIAT1Q6ZQX7 453 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 LRRC18Q8N456 261 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BHQ93079 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 GPR61Q9BZJ8 451 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 GFOD1Q9NXC2 390 aa12.2□□□□□ -0.46
APOB-202ENST00000399256 H3BMH7 237 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 CYB5BO43169 146 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 TRAF3IP2O43734 574 aaPredicted RBP12.19□□□□□ -0.46
APOB-202ENST00000399256 ALDH3B1P43353 468 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 ARL4DP49703 201 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 DLK1P80370 383 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 IL13RA2Q14627 380 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 TMEM176BQ3YBM2 270 aaPredicted RBP12.19□□□□□ -0.46
APOB-202ENST00000399256 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 C14orf144Q96I85 54 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 C18orf12Q96KH6 178 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 CDX2Q99626 313 aaPredicted RBP12.19□□□□□ -0.46
APOB-202ENST00000399256 SLC2A9Q9NRM0 540 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 DECR2Q9NUI1 292 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 NECAP2Q9NVZ3 263 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 KLRF1Q9NZS2 232 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 PIAS3Q9Y6X2 628 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 MED12Q93074 2177 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 CCDC187A0A096LP49 1063 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 HSD17B6O14756 317 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 PHF1O43189 567 aaPredicted RBP12.19□□□□□ -0.46
APOB-202ENST00000399256 SOD3P08294 240 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 ATP6V0CP27449 155 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 GRB2P62993 217 aaKnown RBP12.19□□□□□ -0.46
APOB-202ENST00000399256 SLC16A14Q7RTX9 510 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 PHF7Q9BWX1 381 aaPredicted RBP12.19□□□□□ -0.46
APOB-202ENST00000399256 PISDQ9UG56 409 aa12.19□□□□□ -0.46
APOB-202ENST00000399256 A0A1B0GW64 132 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 OR5H15A6NDH6 313 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 SPRY1O43609 319 aaPredicted RBP12.18□□□□□ -0.46
APOB-202ENST00000399256 ONECUT2O95948 504 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 TRGC2P03986 189 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 ARL6IP1Q15041 203 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 SPSB3Q6PJ21 355 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 ZNF429Q86V71 674 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 DEFB119Q8N690 84 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 HAS2Q92819 552 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 Q96M66 194 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 GPR173Q9NS66 373 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
APOB-202ENST00000399256 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
APOB-202ENST00000399256 ZNF41P51814 821 aaPredicted RBP12.18□□□□□ -0.46
APOB-202ENST00000399256 PRSS12P56730 875 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 GNMTQ14749 295 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 CYB561D1Q8N8Q1 229 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 BOD1Q96IK1 185 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
APOB-202ENST00000399256 LILRA5A6NI73 299 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 DHRS3O75911 302 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms