RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 A0A1W2PP11 408 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR2AT4A6NND4 320 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MAGEB3O15480 346 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CDRT1O95170 752 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 WNT2P09544 360 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR10A3P58181 314 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ZNF788Q6ZQV5 615 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 DCDC5Q6ZRR9 648 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SLC16A12Q6ZSM3 486 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CDH26Q8IXH8 852 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 MKXQ8IYA7 352 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SPICQ8N5J4 248 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 JAGN1Q8N5M9 183 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FAM216BQ8N7L0 139 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 OR10K1Q8NGX5 313 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C12orf43Q96C57 262 aaKnown RBP10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 C18orf12Q96KH6 178 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GAFA1Q96PS6 74 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 GPER1Q99527 375 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 CCL13Q99616 98 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SMR3AQ99954 134 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 FUNDC2Q9BWH2 189 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 NAA50Q9GZZ1 169 aaKnown RBP10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 HMG20AQ9NP66 347 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 RASL12Q9NYN1 266 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 KAAG1Q9UBP8 84 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 SSR3Q9UNL2 185 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 AK6Q9Y3D8 172 aaKnown RBP10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 ARHGAP32A7KAX9 2087 aa10.34□□□□□ -0.75
HLA-DQB1-203ENST00000399082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 LOC100506127A0A0U1RQW1 187 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MEGF11A6BM72 1044 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 RFPL4AA6NLU0 287 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 KIAA1324LA8MWY0 1029 aaPredicted RBP10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 RFPL4AL1F8VTS6 287 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 TRAPPC2LH3BP13 241 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 LCE2BO14633 110 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 NXPH2O95156 264 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 KNG1P01042 644 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CLEC2LP0C7M8 214 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ZFP36P26651 326 aaKnown RBP10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MICBQ29980 383 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SMIM21Q3B7S5 101 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ATPAF1Q5TC12 328 aaPredicted RBP10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 FAM58AQ8N1B3 248 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CD177Q8N6Q3 437 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 EMG1Q92979 244 aaKnown RBP10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SLC25A28Q96A46 364 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 UQCC2Q9BRT2 126 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 FAM192AQ9GZU8 254 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 KCNK15Q9H427 330 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 IL36GQ9NZH8 169 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ZNF581Q9P0T4 197 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 DNAJB11Q9UBS4 358 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MRPS28Q9Y2Q9 187 aaKnown RBP10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MALRD1Q5VYJ5 2156 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ABCA1O95477 2261 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CSPG4Q6UVK1 2322 aa10.33□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SMIM30A4D0T7 59 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SLC22A1O15245 554 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ADAM20O43506 726 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 INHBBP09529 407 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CD99P14209 185 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 RPS2P15880 293 aaKnown RBP10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 DUSP1P28562 367 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 FGF12P61328 243 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ZNF146Q15072 292 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 DGUOKQ16854 277 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ELP2Q6IA86 826 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 GLIPR1L1Q6UWM5 242 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 Q8IYB0 196 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MSI2Q96DH6 328 aaKnown RBP10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 NEIL1Q96FI4 390 aaPredicted RBP10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CPNE2Q96FN4 548 aaPredicted RBP10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SDSLQ96GA7 329 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CYYR1Q96J86 154 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SLITRK2Q9H156 845 aa10.32□□□□□ -0.76
HLA-DQB1-203ENST00000399082 ANK3Q12955 4377 aaKnown RBP10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 A8MXK9 166 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SLC17A2O00624 439 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SIGLEC5O15389 551 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PHF1O43189 567 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 AIREO43918 545 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 GABARAPO95166 117 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CYB5AP00167 134 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PRKACAP17612 351 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MYL9P24844 172 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CFPP27918 469 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PRDX2P32119 198 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SDC2P34741 201 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PITPNBP48739 271 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 MTNR1BP49286 362 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 SNU13P55769 128 aaKnown RBP10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 CAV3P56539 151 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 QRFPP83859 136 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PAX2Q02962 417 aa10.31□□□□□ -0.76
HLA-DQB1-203ENST00000399082 PDCD1Q15116 288 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms