RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 STRAPQ9Y3F4 350 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 LIPT2A6NK58 231 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 QDPRP09417 244 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 FPR2P25090 351 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 OR3A2P47893 321 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 TMEM33P57088 247 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 CLRN1P58418 232 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 SLC10A1Q14973 349 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 C5orf24Q7Z6I8 188 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 OR2AJ1Q8NGZ0 328 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 NPRL2Q8WTW4 380 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 B3GAT1Q9P2W7 334 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 FER1L5A0AVI2 2057 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 MED12Q93074 2177 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF708P17019 499 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 LMO1P25800 156 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 APOBEC1P41238 236 aaKnown RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 CSNK2A1P68400 391 aaPredicted RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 CSNK2A3Q8NEV1 391 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 OR14K1Q8NGZ2 314 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 RNASEH2CQ8TDP1 164 aaKnown RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 ANAPC10Q9UM13 185 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 A0A087WZY1 265 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 TGIF2-C20orf24A0A0A6YYL0 155 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 VSTM2BA6NLU5 285 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF878C9JN71 531 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 RER1O15258 196 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 KNG1P01042 644 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 GZMBP10144 247 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF25P17030 456 aaPredicted RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 CD200P41217 278 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 ERVFRD-1P60508 538 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 HIKESHIQ53FT3 197 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 AADACL3Q5VUY0 350 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 GALNTL5Q7Z4T8 443 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 SEMA6DQ8NFY4 1073 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 RAB39BQ96DA2 213 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 JSRP1Q96MG2 331 aaPredicted RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 SMIM3Q9BZL3 60 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 ACTR3CQ9C0K3 210 aaPredicted RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 EHFQ9NZC4 300 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 OR14J1Q9UGF5 321 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 COL5A1P20908 1838 aaPredicted RBP14□□□□□ -0.17
CHMP1A-201ENST00000397901 RTTNQ86VV8 2226 aa14□□□□□ -0.17
CHMP1A-201ENST00000397901 CEACAM18A8MTB9 384 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 H3BQ15 152 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 TGOLN2O43493 480 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 EFNA2O43921 213 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 SNU13P55769 128 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 UBE2KP61086 200 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 C17orf67Q0P5P2 114 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 SPEM2Q0P670 501 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 FAM57BQ71RH2 274 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 GPR137CQ8N3F9 429 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 OR51T1Q8NGJ9 327 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 ABHD5Q8WTS1 349 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 SCGB3A2Q96PL1 93 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 ALKBH4Q9NXW9 302 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 MYF5P13349 255 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF17P17021 662 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 MYBPHQ13203 477 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 PEG10Q86TG7 708 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 HSD17B11Q8NBQ5 300 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 CADM4Q8NFZ8 388 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 OR10J5Q8NHC4 309 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 FRZBQ92765 325 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 MRPL13Q9BYD1 178 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 CHRNA10Q9GZZ6 450 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 URGCP-MRPS24S4R325 110 aa13.99□□□□□ -0.17
CHMP1A-201ENST00000397901 BORCS7-ASMTA0A0B4J1R7 106 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 C5orf63A6NC05 138 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 NPIPB13A6NJU9 1138 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 NPIPB4C9JG80 1138 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 PRH1P02810 166 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 CFHR1Q03591 330 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 OGFOD3Q6PK18 319 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 Q7L0L9 218 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 C1QL2Q7Z5L3 287 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 UEVLDQ8IX04 471 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 OR10A2Q9H208 303 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 PITPNC1Q9UKF7 332 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 OSGIN2Q9Y236 505 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 B3GALT5Q9Y2C3 310 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 GOLT1BQ9Y3E0 138 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 IGKV1-9A0A0C4DH69 117 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 A0A1B0GX78 115 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 A0A1W2PNR3 127 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 LMO7DNF2Z398 122 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 RPS2P15880 293 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 HNRNPKP61978 463 aaKnown RBP eCLIP13.98□□□□□ -0.175e-9■■■■■ 29.4
CHMP1A-201ENST00000397901 GABREP78334 506 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 THEM4Q5T1C6 240 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 LHFPL1Q86WI0 220 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF283Q8N7M2 679 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 LIN37Q96GY3 246 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 URM1Q9BTM9 101 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 SNHG12Q9BXW3 62 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 PCED1AQ9H1Q7 454 aa13.98□□□□□ -0.17
CHMP1A-201ENST00000397901 KLRF1Q9NZS2 232 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms