RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GEMIN2O14893 280 aaKnown RBP23.24■■□□□ 1.31
CPNE1-203ENST00000397442 GSTZ1O43708 216 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-203ENST00000397442 CD55P08174 381 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 SRP9P49458 86 aaKnown RBP23.24■■□□□ 1.31
CPNE1-203ENST00000397442 STEAP3Q658P3 488 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 CLEC18BQ6UXF7 455 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 DNM1P46Q6ZS02 220 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 MUC15Q8N387 334 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 CLEC18CQ8NCF0 446 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 C15orf40Q8WUR7 153 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 SMIM4Q8WVI0 70 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 DIRC2Q96SL1 478 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 RHOFQ9HBH0 211 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 ELF5Q9UKW6 265 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-203ENST00000397442 KCNK7Q9Y2U2 307 aa23.24■■□□□ 1.31
CPNE1-203ENST00000397442 MEIOCA2RUB1 952 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 LANCL1O43813 399 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 GABRR1P24046 479 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 RBMXP38159 391 aaKnown RBP23.23■■□□□ 1.31
CPNE1-203ENST00000397442 LYSMD2Q8IV50 215 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 POC1AQ8NBT0 407 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 YIPF5Q969M3 257 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 TRIM63Q969Q1 353 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 RAB3CQ96E17 227 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 C1orf123Q9NWV4 160 aa23.23■■□□□ 1.31
CPNE1-203ENST00000397442 SPTAN1Q13813 2472 aaKnown RBP23.23■■□□□ 1.31
CPNE1-203ENST00000397442 A6NNC1 897 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 PLA2G2AP14555 144 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 BLVRBP30043 206 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-203ENST00000397442 PMELP40967 661 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 CDNFQ49AH0 187 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 FAM58AQ8N1B3 248 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 CHST4Q8NCG5 386 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 ARHGAP5-AS1Q96IT6 56 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 THAP7Q9BT49 309 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-203ENST00000397442 HES4Q9HCC6 221 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 PRSS44E7EML9 344 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 HIST1H1DP16402 221 aaKnown RBP23.22■■□□□ 1.31
CPNE1-203ENST00000397442 GNB3P16520 340 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 TNFSF4P23510 183 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 HOXA4Q00056 320 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-203ENST00000397442 RNASE12Q5GAN4 147 aaKnown RBP23.22■■□□□ 1.31
CPNE1-203ENST00000397442 Q8IYB0 196 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 OR52I2Q8NH67 350 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 FBXW5Q969U6 566 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 POM121Q96HA1 1249 aa23.22■■□□□ 1.31
CPNE1-203ENST00000397442 A0A1W2PQ09 198 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 TMEM235A6NFC5 223 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 GABARAPH6UMI1 98 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 MELTFP08582 738 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 CD3GP09693 182 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 PRKACAP17612 351 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 CFHR2P36980 270 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 MRPS10P82664 201 aaKnown RBP23.21■■□□□ 1.31
CPNE1-203ENST00000397442 MOGAT3Q86VF5 341 aa23.21■■□□□ 1.31
CPNE1-203ENST00000397442 EMG1Q92979 244 aaKnown RBP23.21■■□□□ 1.31
CPNE1-203ENST00000397442 MFNGO00587 321 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 HS3ST1O14792 307 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 SNU13P55769 128 aaKnown RBP23.2■■□□□ 1.3
CPNE1-203ENST00000397442 CCL8P80075 99 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 GUCA2AQ02747 115 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 PDCD1Q15116 288 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 OLFML2AQ68BL7 652 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 Q6ZTK2 550 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 SPOCK3Q9BQ16 436 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 MS4A5Q9H3V2 200 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 FN3KRPQ9HA64 309 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 GCM1Q9NP62 436 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 DYNLRB1Q9NP97 96 aa23.2■■□□□ 1.3
CPNE1-203ENST00000397442 FAM209AQ5JX71 171 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 PECRQ9BY49 303 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 WDR13Q9H1Z4 485 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.19■■□□□ 1.31e-7■■■■□ 24.8
CPNE1-203ENST00000397442 RBMX2Q9Y388 322 aaKnown RBP23.19■■□□□ 1.3
CPNE1-203ENST00000397442 hCG_1807616A0A1W2PRN6 198 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A10PA6NDY2 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A18PA6NE21 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A16PA6NEW6 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A20PA6NIJ5 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A8PA6NJQ4 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A7PA6NKC0 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A22PA8MWA6 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A12PA8MX19 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A5PA8MXJ8 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A23PA8MXZ1 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 WNT9BO14905 357 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A15PP0C7V4 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A13PP0C7W8 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A14PP0C7W9 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM90A24PP0C7X0 464 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 CHATP28329 748 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 PRSS3P35030 304 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 OR10Z1Q8NGY1 313 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 LRRC29Q8WV35 223 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FCAMRQ8WWV6 532 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 ST8SIA4Q92187 359 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 SEH1LQ96EE3 360 aa23.19■■□□□ 1.3
CPNE1-203ENST00000397442 FAM221AA4D161 298 aa23.18■■□□□ 1.3
CPNE1-203ENST00000397442 NXPH2O95156 264 aa23.18■■□□□ 1.3
CPNE1-203ENST00000397442 CLDN1O95832 211 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms