RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RFPL4BQ6ZWI9 263 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 CHST4Q8NCG5 386 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 OR5L1Q8NGL2 311 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 OR13C8Q8NGS7 320 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 OR8S1Q8NH09 359 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 NUDCD2Q8WVJ2 157 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 BCL2L14Q9BZR8 327 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 SELENOIQ9C0D9 397 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 A0A1W2PP11 408 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 M0QYG6 137 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 XRCC2O43543 280 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 CA11O75493 328 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 OR2A4O95047 310 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 AMY2AP04746 511 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 GIPP09681 153 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-207ENST00000397200 PPP1CBP62140 327 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 MALLQ13021 153 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
CAPN3-207ENST00000397200 NLRC3Q7RTR2 1065 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 C1QL2Q7Z5L3 287 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 RTN4RL2Q86UN3 420 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 OR11H4Q8NGC9 324 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 RAB3CQ96E17 227 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 CPNE2Q96FN4 548 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-207ENST00000397200 OR2A7Q96R45 310 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 SPOCK3Q9BQ16 436 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 PIPOXQ9P0Z9 390 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 STARD10Q9Y365 291 aa12.75□□□□□ -0.37
CAPN3-207ENST00000397200 DEFB108AA8MXU0 73 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 DISC1C4P0D8 188 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 SOCS1O15524 211 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 CRTAPO75718 401 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-207ENST00000397200 GSTT2P0CG29 244 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 PRKACBP22694 351 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 FAM3AP98173 230 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 DHODHQ02127 395 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
CAPN3-207ENST00000397200 ADAM5Q6NVV9 412 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 IDO2Q6ZQW0 420 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 C1orf174Q8IYL3 243 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 BPIFB2Q8N4F0 458 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 OR1J1Q8NGS3 322 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 TNFAIP8L1Q8WVP5 186 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 SLC6A7Q99884 636 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 PRRT1Q99946 306 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 BANF2Q9H503 90 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 MGAT4CQ9UBM8 478 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 ZNF69Q9UC07 566 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 CADP27708 2225 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 LRRK2Q5S007 2527 aa12.74□□□□□ -0.37
CAPN3-207ENST00000397200 TMEM82A0PJX8 343 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 SIAH2O43255 324 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ZNF780AO75290 641 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-207ENST00000397200 MGMTP16455 207 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 TUBG1P23258 451 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 RPS23P62266 143 aaKnown RBP12.73□□□□□ -0.37
CAPN3-207ENST00000397200 SLC22A6Q4U2R8 563 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 CLVS2Q5SYC1 327 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 SPATA46Q5T0L3 261 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ATPAF1Q5TC12 328 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-207ENST00000397200 GVQW1Q8N7I0 195 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ZDHHC22Q8N966 263 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 OR4S1Q8NGB4 309 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ST8SIA4Q92187 359 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 SNAPC3Q92966 411 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 PIGTQ969N2 578 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 MRGPRFQ96AM1 343 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 TECTBQ96PL2 329 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 OCSTAMPQ9BR26 566 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 IFT46Q9NQC8 304 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 TUBG2Q9NRH3 451 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 GPR173Q9NS66 373 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 CA10Q9NS85 328 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 RNF115Q9Y4L5 304 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ATP23Q9Y6H3 246 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 TENM4Q6N022 2769 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 UBE2QL1A1L167 161 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 H3BUI4 141 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 FCER2P06734 321 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 CBX5P45973 191 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 GNG2P59768 71 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 RAP2BP61225 183 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ERVS71-1P61550 626 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 NKX6-1P78426 367 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ZNF92Q03936 586 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 DAZAP2Q15038 168 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ARL6IP1Q15041 203 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 VAX1Q5SQQ9 334 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 MRPL21Q7Z2W9 205 aaKnown RBP12.73□□□□□ -0.37
CAPN3-207ENST00000397200 NUP37Q8NFH4 326 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 SLC25A40Q8TBP6 338 aa12.73□□□□□ -0.37
CAPN3-207ENST00000397200 ZNF431Q8TF32 576 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms