RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 THEM6Q8WUY1 208 aa6.64□□□□□ -1.35
SCFD1-202ENST00000396629 MED20Q9H944 212 aa6.64□□□□□ -1.35
SCFD1-202ENST00000396629 SEBOXQ9HB31 216 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-202ENST00000396629 ABCD2Q9UBJ2 740 aa6.64□□□□□ -1.35
SCFD1-202ENST00000396629 DNAJB9Q9UBS3 223 aa6.64□□□□□ -1.35
SCFD1-202ENST00000396629 TMEM82A0PJX8 343 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A18PA6NE21 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A16PA6NEW6 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A20PA6NIJ5 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A9PA6NNJ1 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A12PA8MX19 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A5PA8MXJ8 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 SEC14L6B5MCN3 397 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 LY6LH3BQJ8 138 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 GSC2O15499 205 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 IFNGP01579 166 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A15PP0C7V4 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A13PP0C7W8 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A14PP0C7W9 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM90A24PP0C7X0 464 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 HMGA2P52926 109 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 TMEM42Q69YG0 159 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 BAIAP2L2Q6UXY1 529 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 HACD2Q6Y1H2 254 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 OR9Q2Q8NGE9 314 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 CDRT15Q96T59 188 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 BTBD10Q9BSF8 475 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 DCLRE1BQ9H816 532 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 GORASP2Q9H8Y8 452 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 CMC2Q9NRP2 79 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 FAM206AQ9NX38 181 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 ENPP5Q9UJA9 477 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 PIGLQ9Y2B2 252 aa6.63□□□□□ -1.35
SCFD1-202ENST00000396629 SORL1Q92673 2214 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 OOSP1A8MZH6 123 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 PSMD9O00233 223 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 GASTP01350 101 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 COX4I1P13073 169 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 ZNF3P17036 446 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 CD34P28906 385 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 SLC35B1P78383 322 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 IL24Q13007 206 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 SAMD4BQ5PRF9 694 aaKnown RBP6.62□□□□□ -1.35
SCFD1-202ENST00000396629 TPTE2P1Q5T6R2 138 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 OR52W1Q6IF63 320 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 ADAMTSL5Q6ZMM2 481 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 C5orf56Q8N8D9 126 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 OR2T33Q8NG76 320 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 OR8U1Q8NH10 309 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 PKIBQ9C010 78 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 ZMAT4Q9H898 229 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 KLHDC2Q9Y2U9 406 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 UBE2J1Q9Y385 318 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-202ENST00000396629 V9GYQ6 96 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 KIAA2026Q5HYC2 2103 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 ARRDC5A6NEK1 342 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 FAM183AA6NL82 134 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 RIIAD1A6NNX1 92 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 BUB1B-PAK6H3BSN5 160 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 SELENOFO60613 162 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 IGHG2P01859 326 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 FABP3P05413 133 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 PEX2P28328 305 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 CEACAM3P40198 252 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 SF3A3Q12874 501 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCFD1-202ENST00000396629 EDDM3AQ14507 147 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 CLVS2Q5SYC1 327 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 CGB2Q6NT52 195 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 STPG2Q8N412 459 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 TPRX1Q8N7U7 411 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 OR52N4Q8NGI2 321 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 OR51E1Q8TCB6 317 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 MCUR1Q96AQ8 359 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 CREB3L1Q96BA8 519 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 TEAD3Q99594 435 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 EFCAB1Q9HAE3 211 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 EDA2RQ9HAV5 297 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 IL1RAPQ9NPH3 570 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 GPR84Q9NQS5 396 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 GPR173Q9NS66 373 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 ARMC1Q9NVT9 282 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 LINC00527Q9UJ94 153 aa6.62□□□□□ -1.35
SCFD1-202ENST00000396629 SIRT4Q9Y6E7 314 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-202ENST00000396629 SERPINE3A8MV23 424 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 F8VVB4 439 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 F8VWA3 439 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 DLGAP1O14490 977 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 FGF16O43320 207 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 DHRS3O75911 302 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 KRT36O76013 467 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 FAM106CPP0CH98 169 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 H2AFXP16104 143 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-202ENST00000396629 ERP29P30040 261 aaKnown RBP6.61□□□□□ -1.35
SCFD1-202ENST00000396629 MNDAP41218 407 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 CDX1P47902 265 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-202ENST00000396629 INSL3P51460 131 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 PLECQ15149 4684 aaKnown RBP6.61□□□□□ -1.35
SCFD1-202ENST00000396629 HLA-DRB5Q30154 266 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 DEFB136Q30KP8 78 aa6.61□□□□□ -1.35
SCFD1-202ENST00000396629 ZNF260Q3ZCT1 412 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms