RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TGIF1Q15583 401 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 LPAL2Q16609 132 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 RSPO1Q2MKA7 263 aaPredicted RBP11.61□□□□□ -0.55
TRIM40-207ENST00000396581 AKIRIN2Q53H80 203 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.61□□□□□ -0.55
TRIM40-207ENST00000396581 TCTEX1D2Q8WW35 142 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 LOXL4Q96JB6 756 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 PBDC1Q9BVG4 233 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 FER1L5A0AVI2 2057 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF883P0CG24 379 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 CAMLGP49069 296 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 KRBOX4Q5JUW0 171 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 C10orf128Q5T292 105 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 CARD17Q5XLA6 110 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 LCN10Q6JVE6 187 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 LRRC18Q8N456 261 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
TRIM40-207ENST00000396581 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 CCDC74BQ96LY2 380 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 OR6C1Q96RD1 312 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 MESP1Q9BRJ9 268 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 PARP12Q9H0J9 701 aaKnown RBP11.6□□□□□ -0.55
TRIM40-207ENST00000396581 PLEKHJ1Q9NW61 149 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 KLRF1Q9NZS2 232 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 MIOXQ9UGB7 285 aa11.6□□□□□ -0.55
TRIM40-207ENST00000396581 A0A1W2PNR3 127 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 hCG_1809904A0A1W2PP81 198 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 A0A1W2PR64 198 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 A0A1W2PRV1 198 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 K7N7A8 449 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 M0R036 132 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 NTN3O00634 580 aaPredicted RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 RAMP1O60894 148 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 OR5AC1P0C628 307 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 NR2C1P13056 603 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 FAHP16930 419 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 FKBP2P26885 142 aaKnown RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 MPLP40238 635 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 FHITP49789 147 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 ADAMTS20P59510 1910 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 ENDOGQ14249 297 aaKnown RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 DMRTC1Q5HYR2 192 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 SHISA6Q6ZSJ9 500 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 FAM24BQ8N5W8 94 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 GJC3Q8NFK1 279 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 OR8G5Q8NG78 346 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 NPRL2Q8WTW4 380 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 MSI2Q96DH6 328 aaKnown RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 FBXO17Q96EF6 278 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 S100A13Q99584 98 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 PIGQQ9BRB3 760 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 HDHD3Q9BSH5 251 aaPredicted RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 ANGPTL4Q9BY76 406 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 EIF5A2Q9GZV4 153 aaKnown RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 C11orf1Q9H5F2 150 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF160Q9HCG1 818 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 KCNJ16Q9NPI9 418 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 NECAP2Q9NVZ3 263 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 HDGFL3Q9Y3E1 203 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF726A6NNF4 738 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 SCGB1D2O95969 90 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 DAOP14920 347 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 MSR1P21757 451 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 UCP3P55916 312 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 FOXL2P58012 376 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 SP5Q6BEB4 398 aaPredicted RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 PLXDC2Q6UX71 529 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 OR2M3Q8NG83 312 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 THAP3Q8WTV1 239 aaPredicted RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 RTN4IP1Q8WWV3 396 aaPredicted RBP11.59□□□□□ -0.55
TRIM40-207ENST00000396581 NELFAQ9H3P2 528 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 RARRES3Q9UL19 164 aa11.59□□□□□ -0.55
TRIM40-207ENST00000396581 TRAV20A0A0B4J274 112 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ONECUT2O95948 504 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ZNF728P0DKX0 622 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TMEM225BP0DP42 221 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 DUSP1P28562 367 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 CLINT1Q14677 625 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 HEPN1Q6WQI6 88 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ASCL4Q6XD76 172 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 OR4D5Q8NGN0 318 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TMEM54Q969K7 222 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 NABP1Q96AH0 204 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 NTNG2Q96CW9 530 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 WDR77Q9BQA1 342 aaPredicted RBP11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ARRDC1-AS1Q9H2J1 176 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 AK3Q9UIJ7 227 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 PIGLQ9Y2B2 252 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 NSG1A0A0A6YYJ2 146 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
TRIM40-207ENST00000396581 ST8SIA3O43173 380 aa11.58□□□□□ -0.56
TRIM40-207ENST00000396581 TLX3O43711 291 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms