RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 PUS1Q9Y606 427 aaKnown RBP eCLIP7.58□□□□□ -1.2
BDNF-204ENST00000395980 ELOA3CA0A087WX78 387 aaPredicted RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 RPL36A-HNRNPH2H7BZ11 118 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 HSPA12AO43301 675 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 HSPB1P04792 205 aaKnown RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 CSNK1A1P48729 337 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SSTP61278 116 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SPSB3Q6PJ21 355 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 CLEC9AQ6UXN8 241 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 C16orf47Q6ZP98 133 aaPredicted RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 ANKRD37Q7Z713 158 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 OR2C3Q8N628 320 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 OR5L2Q8NGL0 311 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 PIGTQ969N2 578 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SPIN2AQ99865 258 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SPIN2BQ9BPZ2 258 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 FER1L5A0AVI2 2057 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 A0A1W2PR77 199 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 C5orf63A6NC05 138 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 H3BQ15 152 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 TGOLN2O43493 480 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SRP19P09132 144 aaKnown RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 PTGDSP41222 190 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 NHLH2Q02577 135 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 SP6Q3SY56 376 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 PYY3Q5JQD4 70 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 C1orf189Q5VU69 101 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 DPPA3Q6W0C5 159 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 FBXL14Q8N1E6 418 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 OR52M1Q8NGK5 317 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 AKR7LQ8NHP1 331 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SLC25A31Q9H0C2 315 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 ZNF286AQ9HBT8 521 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 IGHV1OR21-1A0A087WYE8 117 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 FAM230AA0A1W2PPH8 454 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 IFITM10A6NMD0 228 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 ZNF732B4DXR9 585 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 HEXBP07686 556 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 MMP9P14780 707 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 FOLR1P15328 257 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 CNN3Q15417 329 aaKnown RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 ZNF506Q5JVG8 444 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 SLC35E3Q7Z769 313 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 OR2M3Q8NG83 312 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 OR10G4Q8NGN3 311 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 OR2G3Q8NGZ4 309 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 TMEM54Q969K7 222 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 RAB39BQ96DA2 213 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 GNPNAT1Q96EK6 184 aaPredicted RBP7.57□□□□□ -1.2
BDNF-204ENST00000395980 POM121Q96HA1 1249 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 PFDN5Q99471 154 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 DOK5Q9P104 306 aa7.57□□□□□ -1.2
BDNF-204ENST00000395980 TRBV23-1A0A0A0MS06 115 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 IGHV3-20A0A0C4DH32 117 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 ZNF814B7Z6K7 855 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 HSD17B6O14756 317 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 BCAT2O15382 392 aaPredicted RBP7.56□□□□□ -1.2
BDNF-204ENST00000395980 DUX1O43812 170 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 ITGA3P26006 1051 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 CD38P28907 300 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 RSU1Q15404 277 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 RBMXL1Q96E39 390 aaKnown RBP7.56□□□□□ -1.2
BDNF-204ENST00000395980 CCDC187A0A096LP49 1063 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 A0A1W2PNR3 127 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 B4DEV8 164 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 M0R135 149 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 YIF1AO95070 293 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 HBE1P02100 147 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 CEACAM1P13688 526 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 TAGLN2P37802 199 aaKnown RBP7.56□□□□□ -1.2
BDNF-204ENST00000395980 MTCP1P56278 107 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 UBE2KP61086 200 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 ELOBQ15370 118 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 SPTSSAQ969W0 71 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 ZNF501Q96CX3 271 aaPredicted RBP7.56□□□□□ -1.2
BDNF-204ENST00000395980 TVP23CQ96ET8 276 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 ZNF799Q96GE5 643 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 RARRES2Q99969 163 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 FAAP24Q9BTP7 215 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 PLEKHF2Q9H8W4 249 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 IL36GQ9NZH8 169 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 NXT1Q9UKK6 140 aaKnown RBP7.56□□□□□ -1.2
BDNF-204ENST00000395980 TRBV11-1A0A0K0K1C0 115 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 DUXBA0A1W2PPF3 345 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 F5H5K5 113 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 CD27P26842 260 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 RND3P61587 244 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 HNRNPKP61978 463 aaKnown RBP eCLIP7.56□□□□□ -1.2
BDNF-204ENST00000395980 DEFA6Q01524 100 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 NABP1Q96AH0 204 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 RALGAPA1Q6GYQ0 2036 aa7.56□□□□□ -1.2
BDNF-204ENST00000395980 TRDCB7Z8K6 153 aa7.55□□□□□ -1.2
BDNF-204ENST00000395980 RAMP1O60894 148 aa7.55□□□□□ -1.2
BDNF-204ENST00000395980 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
BDNF-204ENST00000395980 HIST1H1BP16401 226 aaKnown RBP7.55□□□□□ -1.2
BDNF-204ENST00000395980 CLDN17P56750 224 aa7.55□□□□□ -1.2
BDNF-204ENST00000395980 HERV-K104P61576 105 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms