RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PAX2Q02962 417 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 INSL4Q14641 139 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 ATPAF1Q5TC12 328 aaPredicted RBP13.76□□□□□ -0.21
CXCL1-201ENST00000395761 ZNF529Q6P280 563 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 ACP7Q6ZNF0 438 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 SLC25A26Q70HW3 274 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 FAM216BQ8N7L0 139 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 OR51A2Q8NGJ7 313 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 RFT1Q96AA3 541 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 NRIP2Q9BQI9 281 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 SHARPINQ9H0F6 387 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 TXNL4BQ9NX01 149 aaKnown RBP13.76□□□□□ -0.21
CXCL1-201ENST00000395761 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 KAAG1Q9UBP8 84 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 POLDIP2Q9Y2S7 368 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 IGKV1D-17A0A075B6S4 117 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 A0A1W2PPK0 400 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 OR2AT4A6NND4 320 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 DVL1O14640 695 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 SPRY1O43609 319 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-201ENST00000395761 SULT1B1O43704 296 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 AIREO43918 545 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 ARL6IP5O75915 188 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 NXPH2O95156 264 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 ACAA1P09110 424 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-201ENST00000395761 PSG2P11465 335 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 SELLP14151 372 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 IGFBP3P17936 291 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-201ENST00000395761 FSTP19883 344 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 POU3F4P49335 361 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 DCAF12L2Q5VW00 463 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 GPR107Q5VW38 600 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 ZNF788Q6ZQV5 615 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 C1orf229Q6ZS94 237 aaPredicted RBP13.75□□□□□ -0.21
CXCL1-201ENST00000395761 LHFPL2Q6ZUX7 228 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 GAFA1Q96PS6 74 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 TMPRSS13Q9BYE2 586 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 PPIL3Q9H2H8 161 aaKnown RBP13.75□□□□□ -0.21
CXCL1-201ENST00000395761 HES4Q9HCC6 221 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 NOX4Q9NPH5 578 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 ZNF222Q9UK12 451 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 FOXJ3Q9UPW0 622 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 GSTK1Q9Y2Q3 226 aa13.75□□□□□ -0.21
CXCL1-201ENST00000395761 PPIAL4CA0A0B4J2A2 164 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 A0A0G2JMP0 313 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 A0A0X1KG70 313 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 C22orf46C9J442 243 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 GABARAPO95166 117 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 HCKP08631 526 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 RAB3AP20336 220 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 GABRA2P47869 451 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 TMBIM6P55061 237 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 PDZK1IP1Q13113 114 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 IKZF1Q13422 519 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 CHRFAM7AQ494W8 412 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 SLC16A12Q6ZSM3 486 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 SLC36A1Q7Z2H8 476 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 OR4M2Q8NGB6 313 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 OR5D18Q8NGL1 313 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 RAB40AQ8WXH6 277 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 DACT3Q96B18 629 aaPredicted RBP13.74□□□□□ -0.21
CXCL1-201ENST00000395761 CEP19Q96LK0 163 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 CHCHD6Q9BRQ6 235 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 EXOSC4Q9NPD3 245 aaKnown RBP13.74□□□□□ -0.21
CXCL1-201ENST00000395761 NDUFA13Q9P0J0 144 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 OR5V1Q9UGF6 321 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 OPN4Q9UHM6 478 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 CDC42EP3Q9UKI2 254 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 INSIG2Q9Y5U4 225 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 CEPT1Q9Y6K0 416 aa13.74□□□□□ -0.21
CXCL1-201ENST00000395761 LOC105371242A0A075B767 164 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 TRAV1-2A0A0B4J238 106 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 IGKV1-12A0A0C4DH73 117 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 RFPL4AA6NLU0 287 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 RFPL4AL1F8VTS6 287 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 ANGPTL7O43827 346 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 IGKV1D-12P01611 117 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 SRMP19623 302 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 BCL3P20749 454 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 NPBWR2P48146 333 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 CEBPDP49716 269 aaPredicted RBP13.73□□□□□ -0.21
CXCL1-201ENST00000395761 NPY4RP50391 375 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 KISS1Q15726 138 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 CTF1Q16619 201 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 DGUOKQ16854 277 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 SMIM21Q3B7S5 101 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 HSD17B12Q53GQ0 312 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 FAM27D1Q5T7N8 215 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 C22orf42Q6IC83 251 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 CLVS1Q8IUQ0 354 aaPredicted RBP13.73□□□□□ -0.21
CXCL1-201ENST00000395761 OR52N4Q8NGI2 321 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 ST8SIA4Q92187 359 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 NKX3-1Q99801 234 aaPredicted RBP13.73□□□□□ -0.21
CXCL1-201ENST00000395761 NAA50Q9GZZ1 169 aaKnown RBP13.73□□□□□ -0.21
CXCL1-201ENST00000395761 DNTTIP1Q9H147 329 aa13.73□□□□□ -0.21
CXCL1-201ENST00000395761 C7orf69Q9H7B7 122 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms