RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
CLIP2-203ENST00000395060 GAR1Q9NY12 217 aaKnown RBP12.51□□□□□ -0.41
CLIP2-203ENST00000395060 AK3Q9UIJ7 227 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 CCDC187A0A096LP49 1063 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF726A6NNF4 738 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 RHPN2P1A8MT19 583 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 E5RGE8 158 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 HSPB6O14558 160 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 HEXBP07686 556 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF43P17038 809 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 KIAA0895LQ68EN5 471 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 SLC22A25Q6T423 547 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 PBDC1Q9BVG4 233 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF576Q9H609 170 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 CA14Q9ULX7 337 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 NSG2Q9Y328 171 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 HS3ST3A1Q9Y663 406 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 SSSCA1O60232 199 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 IGHMP01871 453 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 RSU1Q15404 277 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 SURF2Q15527 256 aaPredicted RBP12.5□□□□□ -0.41
CLIP2-203ENST00000395060 PPP4R1LQ9P1A2 415 aa12.5□□□□□ -0.41
CLIP2-203ENST00000395060 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 CRYM-AS1A6NIL9 109 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 SHISA7A6NL88 538 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 WRBO00258 174 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF41P51814 821 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-203ENST00000395060 DLK1P80370 383 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 HMGN3Q15651 99 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 SLC38A9Q8NBW4 561 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 ANXA10Q9UJ72 324 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF724A8MTY0 619 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
CLIP2-203ENST00000395060 SOD3P08294 240 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 RND3P61587 244 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 HEPN1Q6WQI6 88 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 DMRTC2Q8IXT2 367 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-203ENST00000395060 NOXO1Q8NFA2 376 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 OR10G3Q8NGC4 313 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 C8orf33Q9H7E9 229 aaPredicted RBP12.49□□□□□ -0.41
CLIP2-203ENST00000395060 METTL7AQ9H8H3 244 aa12.49□□□□□ -0.41
CLIP2-203ENST00000395060 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 P2RY1P47900 373 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 CSNK1A1P48729 337 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF574Q6ZN55 896 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 DOK3Q7L591 496 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 NTNG2Q96CW9 530 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 CEACAM18A8MTB9 384 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 YKT6O15498 198 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 SLC34A2O95436 690 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 PGA4P0DJD7 388 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 PGA3P0DJD8 388 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 SSX9Q7RTT3 188 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 SLC35G3Q8N808 338 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 SLC2A9Q9NRM0 540 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 PLEK2Q9NYT0 353 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 TRBV11-1A0A0K0K1C0 115 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 A0A1W2PQD3 144 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 NKX2-6A6NCS4 301 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF729A6NN14 1252 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 GEMIN2O14893 280 aaKnown RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 PPA1Q15181 289 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 RHEBQ15382 184 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 SNAI3Q3KNW1 292 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 THEM4Q5T1C6 240 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 CRIP3Q6Q6R5 217 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF429Q86V71 674 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
CLIP2-203ENST00000395060 PLEKHA2Q9HB19 425 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
CLIP2-203ENST00000395060 NBEAQ8NFP9 2946 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 SEC11BP0C7V7 166 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HOXA5P20719 270 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 DCAF7P61962 342 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 C17orf67Q0P5P2 114 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 OR2T2Q6IF00 324 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF610Q8N9Z0 462 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 TSTD1Q8NFU3 115 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 NAT6Q93015 286 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 TP53RKQ96S44 253 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 MRPL13Q9BYD1 178 aaKnown RBP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 NAA60Q9H7X0 242 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 SDHAF3Q9NRP4 125 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 MMACHCQ9Y4U1 282 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 POMT1Q9Y6A1 747 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 BLACEA4D250 179 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms