RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
SNCA-204ENST00000394989 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
SNCA-204ENST00000394989 OR5H2Q8NGV7 314 aa12.09□□□□□ -0.47
SNCA-204ENST00000394989 PCDHB10Q9UN67 800 aa12.09□□□□□ -0.47
SNCA-204ENST00000394989 RPL36A-HNRNPH2H7BZ11 118 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 RBP2P50120 134 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 PLGLB1Q02325 96 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 CNN3Q15417 329 aaKnown RBP12.08□□□□□ -0.48
SNCA-204ENST00000394989 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
SNCA-204ENST00000394989 COLCA1Q6ZS62 124 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 PHB2Q99623 299 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.48
SNCA-204ENST00000394989 BCO1Q9HAY6 547 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 ZNF391Q9UJN7 358 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 OSGIN2Q9Y236 505 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 EIF3GO75821 320 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNCA-204ENST00000394989 CRYBA1P05813 215 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 MPGP29372 298 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 ASCL4Q6XD76 172 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 PPP1R1CQ8WVI7 109 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 SPSB4Q96A44 273 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
SNCA-204ENST00000394989 HTR3BO95264 441 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 HLA-HP01893 362 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 CCL2P13500 99 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 SUPT4H1P63272 117 aaKnown RBP12.08□□□□□ -0.48
SNCA-204ENST00000394989 TAF9Q16594 264 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 TMEM128Q5BJH2 165 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.48
SNCA-204ENST00000394989 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 NAXEQ8NCW5 288 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 CSNK2A3Q8NEV1 391 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 OR5AP2Q8NGF4 316 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 PRRG4Q9BZD6 226 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 PRDM14Q9GZV8 571 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 METTL9Q9H1A3 318 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 COA4Q9NYJ1 87 aa12.08□□□□□ -0.48
SNCA-204ENST00000394989 BOD1L1Q8NFC6 3051 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 AGPAT2O15120 278 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 ATP1B3P54709 279 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 PPIAP62937 165 aaKnown RBP12.07□□□□□ -0.48
SNCA-204ENST00000394989 RSU1Q15404 277 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 TMEM17Q86X19 198 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 EMG1Q92979 244 aaKnown RBP12.07□□□□□ -0.48
SNCA-204ENST00000394989 BORCS8Q96FH0 119 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 PARPBPQ9NWS1 579 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 KANTRA0A1W2PQU2 76 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 CA11O75493 328 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 LHFPL2Q6ZUX7 228 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.07□□□□□ -0.48
SNCA-204ENST00000394989 ZFP62Q8NB50 900 aaPredicted RBP12.07□□□□□ -0.48
SNCA-204ENST00000394989 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 ZNF701Q9NV72 531 aaPredicted RBP12.07□□□□□ -0.48
SNCA-204ENST00000394989 PRR13Q9NZ81 148 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 EHFQ9NZC4 300 aa12.07□□□□□ -0.48
SNCA-204ENST00000394989 ABCD4O14678 606 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 TXNL1O43396 289 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 SYNGR4O95473 234 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 SFTPBP07988 381 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 NPBWR1P48145 328 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 PIGYQ3MUY2 71 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 C11orf87Q6NUJ2 197 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 TLNRD1Q9H1K6 362 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 BIN3Q9NQY0 253 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 CRIM1Q9NZV1 1036 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 KLF13Q9Y2Y9 288 aaPredicted RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 FAM96BQ9Y3D0 163 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 ZNF724A8MTY0 619 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 SERPINA5P05154 406 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 FABP1P07148 127 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 FPR2P25090 351 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 OR3A2P47893 321 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 TAS2R46P59540 309 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 PDZK1IP1Q13113 114 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 DAZAP2Q15038 168 aaPredicted RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 ETV3LQ6ZN32 361 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 NUFIP2Q7Z417 695 aaKnown RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 CALHM1Q8IU99 346 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 ZSCAN4Q8NAM6 433 aaPredicted RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 VRK1Q99986 396 aaPredicted RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 TNFSF18Q9UNG2 199 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 ARGFXA6NJG6 315 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 GEMIN2O14893 280 aaKnown RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 XRCC2O43543 280 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 CSTBP04080 98 aaKnown RBP12.06□□□□□ -0.48
SNCA-204ENST00000394989 ADCYAP1P18509 176 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 TAS2R31P59538 309 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 CLEC18BQ6UXF7 455 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 PIP4P1Q86T03 277 aa12.06□□□□□ -0.48
SNCA-204ENST00000394989 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms