RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLC16A6O15403 523 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ANGPTL7O43827 346 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 CHST1O43916 411 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 PSPNO60542 156 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 CIB2O75838 187 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 MMP23AO75900 390 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 TSPAN9O75954 239 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 IGHA1P01876 353 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 FBP1P09467 338 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 PIPP12273 146 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-205ENST00000394892 DUSP1P28562 367 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ALDH3A2P51648 485 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 CAPZA1P52907 286 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 CDC42P60953 191 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 RPL15P61313 204 aaKnown RBP7.18□□□□□ -1.26
ATG4A-205ENST00000394892 GUCA2AQ02747 115 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF91Q05481 1191 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 UTF1Q5T230 341 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 SLC35E4Q6ICL7 350 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 CCBE1Q6UXH8 406 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-205ENST00000394892 BAIAP2L2Q6UXY1 529 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF782Q6ZMW2 699 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-205ENST00000394892 SLC25A26Q70HW3 274 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF561Q8N587 486 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 TPRX1Q8N7U7 411 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 BEND2Q8NDZ0 799 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 TRUB1Q8WWH5 349 aaKnown RBP7.18□□□□□ -1.26
ATG4A-205ENST00000394892 FGGYQ96C11 551 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 MEGF9Q9H1U4 602 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 AMBNQ9NP70 447 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 RBFOX1Q9NWB1 397 aaKnown RBP7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ENOPH1Q9UHY7 261 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 VPREB3Q9UKI3 123 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 FAM96BQ9Y3D0 163 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 RNF114Q9Y508 228 aa7.18□□□□□ -1.26
ATG4A-205ENST00000394892 ODF3BA8MYP8 253 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 H0YAE9 185 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 H3BUX3 64 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 WBP4O75554 376 aaKnown RBP7.17□□□□□ -1.26
ATG4A-205ENST00000394892 ATF1P18846 271 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 BCL3P20749 454 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 COX7A1P24310 79 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 EEF1B2P24534 225 aaKnown RBP7.17□□□□□ -1.26
ATG4A-205ENST00000394892 FUT6P51993 359 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 ACSM1Q08AH1 577 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 LY6EQ16553 131 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 SMN1Q16637 294 aaKnown RBP7.17□□□□□ -1.26
ATG4A-205ENST00000394892 FBLN7Q53RD9 439 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 NCR3LG1Q68D85 454 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 UTS2BQ765I0 119 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 LHFPL3Q86UP9 236 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 OR4S1Q8NGB4 309 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 RGP1Q92546 391 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-205ENST00000394892 C4orf36Q96KX1 117 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 CEP19Q96LK0 163 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 SPACA5Q96QH8 159 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 DPAGT1Q9H3H5 408 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 S100A14Q9HCY8 104 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 POLDIP2Q9Y2S7 368 aa7.17□□□□□ -1.26
ATG4A-205ENST00000394892 SF3B6Q9Y3B4 125 aaKnown RBP7.17□□□□□ -1.26
ATG4A-205ENST00000394892 NOTCH1P46531 2555 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 WNK1Q9H4A3 2382 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 DAPL1A0PJW8 107 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 J3QLW9 94 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 SLC1A7O00341 560 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 ALX3O95076 343 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 ISG15P05161 165 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 UBCP0CG48 685 aaKnown RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 DBTP11182 482 aaKnown RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 ZNF19P17023 458 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 AZGP1P25311 298 aaKnown RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 ATP6V1E1P36543 226 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 GDNFP39905 211 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 OR3A1P47881 315 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 RAB13P51153 203 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 CCR9P51686 369 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 PDZK1IP1Q13113 114 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 DOC2BQ14184 412 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 XAF1Q6GPH4 301 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 ZFP1Q6P2D0 407 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 GDPGP1Q6ZNW5 385 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 Q6ZS46 218 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 EGFL6Q8IUX8 553 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 PQLC1Q8N2U9 271 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 ACBD7Q8N6N7 88 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 DNAAF1Q8NEP3 725 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 OR52I1Q8NGK6 324 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 OR5D13Q8NGL4 314 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 RFKQ969G6 155 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 RFT1Q96AA3 541 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 NKX3-1Q99801 234 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 SSX3Q99909 188 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 CHST6Q9GZX3 395 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 FAM234AQ9H0X4 552 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 PPA2Q9H2U2 334 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 TCF7L1Q9HCS4 588 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 MRPS18AQ9NVS2 196 aaKnown RBP7.16□□□□□ -1.26
ATG4A-205ENST00000394892 FAM118AQ9NWS6 357 aa7.16□□□□□ -1.26
ATG4A-205ENST00000394892 IMPAD1Q9NX62 359 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms