RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LGI3Q8N145 548 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF383Q8NA42 475 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ST3GAL6Q9Y274 331 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 H0YL77 283 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 EIF4E2O60573 245 aaKnown RBP11.62□□□□□ -0.55
NFKB1-202ENST00000394820 OTX2P32243 289 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 RAB5CP51148 216 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 DENND4AQ7Z401 1863 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ALX4Q9H161 411 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-202ENST00000394820 CALHM2Q9HA72 323 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 GSN-AS1Q9NRJ2 163 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 WNK2Q9Y3S1 2297 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 DHRS7CA6NNS2 312 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 GABRA4P48169 554 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 IGLV3-21P80748 117 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF528Q3MIS6 628 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ARHGEF39Q8N4T4 335 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 HIST1H2BAQ96A08 127 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 UCN2Q96RP3 112 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 RARRES3Q9UL19 164 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 WASF3Q9UPY6 502 aa11.62□□□□□ -0.55
NFKB1-202ENST00000394820 C5orf63A6NC05 138 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 MT-ND4LP03901 98 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 IFNA4P05014 189 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 HPNP05981 417 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 GLB1P16278 677 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 COL19A1Q14993 1142 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 IL34Q6ZMJ4 242 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 OR5C1Q8NGR4 320 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 SPTSSAQ969W0 71 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 SNX22Q96L94 193 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 GAR1Q9NY12 217 aaKnown RBP11.61□□□□□ -0.55
NFKB1-202ENST00000394820 PLCE1Q9P212 2302 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 CACNA1BQ00975 2339 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 MMP7P09237 267 aaPredicted RBP11.61□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF735P0CB33 412 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 EIF2S3P41091 472 aaKnown RBP11.61□□□□□ -0.55
NFKB1-202ENST00000394820 PMP22Q01453 160 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 FAM189A2Q15884 450 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 ARRDC1Q8N5I2 433 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 OR1J1Q8NGS3 322 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 PTRH2Q9Y3E5 179 aaKnown RBP11.61□□□□□ -0.55
NFKB1-202ENST00000394820 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 ALG1L2C9J202 215 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 SLC25A4P12235 298 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 TMEM267Q0VDI3 215 aaPredicted RBP11.61□□□□□ -0.55
NFKB1-202ENST00000394820 MPV17LQ2QL34 196 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 TCEAL6Q6IPX3 200 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 OPN5Q6U736 354 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 DTWD2Q8NBA8 298 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 RPS4Y2Q8TD47 263 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 GPR61Q9BZJ8 451 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 RAB18Q9NP72 206 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 UFSP2Q9NUQ7 469 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 SLC2A8Q9NY64 477 aa11.61□□□□□ -0.55
NFKB1-202ENST00000394820 PRR14LQ5THK1 2151 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 GEMIN2O14893 280 aaKnown RBP11.6□□□□□ -0.55
NFKB1-202ENST00000394820 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 FPR2P25090 351 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 SMAD4Q13485 552 aaKnown RBP11.6□□□□□ -0.55
NFKB1-202ENST00000394820 MRPL41Q8IXM3 137 aaKnown RBP11.6□□□□□ -0.55
NFKB1-202ENST00000394820 TMPRSS5Q9H3S3 457 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF286AQ9HBT8 521 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 BLACEA4D250 179 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 WDR1O75083 606 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 CD74P04233 296 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 S100A8P05109 93 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 RNF224P0DH78 156 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 PTGER4P35408 488 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 TMEM50BP56557 158 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 CCL7P80098 99 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 HLA-BQ31612 363 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 DOK3Q7L591 496 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 PAQR4Q8N4S7 273 aaPredicted RBP11.6□□□□□ -0.55
NFKB1-202ENST00000394820 SLC25A43Q8WUT9 341 aaPredicted RBP11.6□□□□□ -0.55
NFKB1-202ENST00000394820 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 G6PC2Q9NQR9 355 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF319Q9P2F9 582 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 GPR132Q9UNW8 380 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 AUP1Q9Y679 476 aa11.6□□□□□ -0.55
NFKB1-202ENST00000394820 CELA2AP08217 269 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 GSTP1P09211 210 aaKnown RBP11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF345Q14585 488 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SPANXN5Q5MJ07 72 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SLC16A14Q7RTX9 510 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 EDAQ92838 391 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 NAT6Q93015 286 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF251Q9BRH9 671 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SLC26A1Q9H2B4 701 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SLC17A5Q9NRA2 495 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF581Q9P0T4 197 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms