RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 SVILO95425 2214 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 A0A1W2PQF6 199 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 SMCO3A2RU48 225 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 RPS16P62249 146 aaKnown RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 MRPS34P82930 218 aaKnown RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 GNMTQ14749 295 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 ELOBQ15370 118 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 SLC22A25Q6T423 547 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 TCTN2Q96GX1 697 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 SRPK3Q9UPE1 567 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 PIGLQ9Y2B2 252 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 NUP210LQ5VU65 1888 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 SRSF10O75494 262 aaKnown RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 GSTP1P09211 210 aaKnown RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 KIR2DL1P43626 348 aaPredicted RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 MMP16P51512 607 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 GABREP78334 506 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 TOMM20Q15388 145 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 BATFQ16520 125 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 H1FNTQ75WM6 255 aaPredicted RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 OR5C1Q8NGR4 320 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 NIPSNAP3BQ9BS92 247 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 ZNF160Q9HCG1 818 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 AURKAIP1Q9NWT8 199 aaPredicted RBP14.34□□□□□ -0.11
PHTF1-205ENST00000393357 LHFPL6Q9Y693 200 aa14.34□□□□□ -0.11
PHTF1-205ENST00000393357 LOC390937A0A1W2PQ73 354 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 OR5H1A6NKK0 313 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 DXOO77932 396 aaKnown RBP14.33□□□□□ -0.12
PHTF1-205ENST00000393357 FOLR1P15328 257 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 MTCP1P56278 107 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 STARD6P59095 220 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 TAS2R46P59540 309 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 OR8G1Q15617 311 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 HMGN3Q15651 99 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 CXorf66Q5JRM2 361 aaPredicted RBP14.33□□□□□ -0.12
PHTF1-205ENST00000393357 ASB10Q8WXI3 467 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 MUCL1Q96DR8 90 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 E5RGE8 158 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 VAX1Q5SQQ9 334 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 PRAMEF20Q5VT98 475 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 RNASE11Q8TAA1 199 aaKnown RBP14.33□□□□□ -0.12
PHTF1-205ENST00000393357 UBALD1Q8TB05 177 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 LMX1AQ8TE12 382 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 RBM24Q9BX46 236 aaKnown RBP14.33□□□□□ -0.12
PHTF1-205ENST00000393357 NSG2Q9Y328 171 aa14.33□□□□□ -0.12
PHTF1-205ENST00000393357 NKX2-6A6NCS4 301 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 FAM3AP98173 230 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 PIGYQ3MUY2 71 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 GRINAQ7Z429 371 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 OR10AD1Q8NGE0 317 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 CCDC187A0A096LP49 1063 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 TCAPO15273 167 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 LINC01565O15544 149 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 ST8SIA3O43173 380 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 OR2J2O76002 312 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 FUT3P21217 361 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 SLC6A8P48029 635 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 VAMP2P63027 116 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 GTF3AQ92664 365 aaKnown RBP14.32□□□□□ -0.12
PHTF1-205ENST00000393357 C1orf147Q96MC9 270 aaPredicted RBP14.32□□□□□ -0.12
PHTF1-205ENST00000393357 SLC46A1Q96NT5 459 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 TAAR9Q96RI9 348 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 LRFN1Q9P244 771 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 WDFY4Q6ZS81 3184 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 ZNF814B7Z6K7 855 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 GNRHRP30968 328 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 HSD17B7P56937 341 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 ZNF154Q13106 437 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 ABHD5Q8WTS1 349 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 LIPHQ8WWY8 451 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 SHDQ96IW2 340 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 FAM210BQ96KR6 192 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 SERINC1Q9NRX5 453 aa14.32□□□□□ -0.12
PHTF1-205ENST00000393357 UBE2J1Q9Y385 318 aaPredicted RBP14.32□□□□□ -0.12
PHTF1-205ENST00000393357 MT-ATP6P00846 226 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 ISG15P05161 165 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 CD55P08174 381 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 ZNF17P17021 662 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 FCARP24071 287 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 GUCA1AP43080 201 aaPredicted RBP14.31□□□□□ -0.12
PHTF1-205ENST00000393357 LBX1P52954 281 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 ERVS71-1P61550 626 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 SLC35G3Q8N808 338 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 TMEM37Q8WXS4 190 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 HIST1H1BP16401 226 aaKnown RBP14.31□□□□□ -0.12
PHTF1-205ENST00000393357 CD33P20138 364 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 RPS18P62269 152 aaKnown RBP14.31□□□□□ -0.12
PHTF1-205ENST00000393357 EWSR1Q01844 656 aaKnown RBP eCLIP14.31□□□□□ -0.12
PHTF1-205ENST00000393357 TESK1Q15569 626 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 LYPD6Q86Y78 171 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 NEK7Q8TDX7 302 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 PPP4R1LQ9P1A2 415 aa14.31□□□□□ -0.12
PHTF1-205ENST00000393357 ZNF107Q9UII5 783 aaPredicted RBP14.31□□□□□ -0.12
PHTF1-205ENST00000393357 FIGNL2A6NMB9 653 aa14.3□□□□□ -0.12
PHTF1-205ENST00000393357 TERTO14746 1132 aaKnown RBP14.3□□□□□ -0.12
PHTF1-205ENST00000393357 FOSL2P15408 326 aa14.3□□□□□ -0.12
PHTF1-205ENST00000393357 TBPP20226 339 aa14.3□□□□□ -0.12
PHTF1-205ENST00000393357 DUSP1P28562 367 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms