RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 LGI3Q8N145 548 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF567Q8N184 647 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 GATD1Q8NB37 220 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 FAM222BQ8WU58 562 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 PITX2Q99697 317 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 RPS6KB2Q9UBS0 482 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 FBXO5Q9UKT4 447 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MYH7P12883 1935 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF705FA8MVS1 300 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 ERI3O43414 337 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 SCRG1O75711 98 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 GABARAPO95166 117 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF705DP0CH99 300 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF705BP0CI00 300 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 CD36P16671 472 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 RIPPLY3P57055 190 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 OR1D5P58170 312 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 COPZ1P61923 177 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SRPXP78539 464 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MPPED2Q15777 294 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 AKR1C8PQ5T2L2 129 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 IZUMO2Q6UXV1 221 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 DNM1P46Q6ZS02 220 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SMIM20Q8N5G0 67 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 LRRC52Q8N7C0 313 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 CCDC71LQ8N9Z2 235 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 GABARAPL3Q9BY60 117 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SIX2Q9NPC8 291 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 DEC1Q9P2X7 70 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 POLR1DQ9Y2S0 133 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HDGFL3Q9Y3E1 203 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MED23Q9ULK4 1368 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TOGARAM1Q9Y4F4 1720 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 AGPAT2O15120 278 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 IFNA4P05014 189 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 RBP1P09455 135 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ERGP11308 486 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HLA-DOBP13765 273 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 CRABP1P29762 137 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 S100A7P31151 101 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HBG1P69891 147 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HBG2P69892 147 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF92Q03936 586 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 RBMY1FQ15415 496 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 TBC1D28Q2M2D7 210 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SYT6Q5T7P8 510 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 CD200R1LQ6Q8B3 271 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MDP1Q86V88 176 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZBTB8OSQ8IWT0 167 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 NEUROG1Q92886 237 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 WDR34Q96EX3 536 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF471Q9BX82 626 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 ASB7Q9H672 318 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MAT2BQ9NZL9 334 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ST3GAL6Q9Y274 331 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 BTRCQ9Y297 605 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ARHGAP23Q9P227 1491 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MFNGO00587 321 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 PLPP3O14495 311 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 PDE6DO43924 150 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 FBP1P09467 338 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HOXB7P09629 217 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZDHHC11BP0C7U3 371 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 THRAP10827 490 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 GNB3P16520 340 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 RPL35P42766 123 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 FABP6P51161 128 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SLC25A11Q02978 314 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZFP1Q6P2D0 407 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TMEM252Q8N6L7 170 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 OR2A1Q8NGT9 310 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 OR10X1Q8NGY0 326 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SARAFQ96BY9 339 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 DNAJC19Q96DA6 116 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SLC25A38Q96DW6 304 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 OXGR1Q96P68 337 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TCEAL7Q9BRU2 100 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MS4A6AQ9H2W1 248 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 OR51I1Q9H343 314 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 BIN3Q9NQY0 253 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ARMCX1Q9P291 453 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF629Q9UEG4 869 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 TNRQ92752 1358 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZFYVE9O95405 1425 aa2.96□□□□□ -1.93
XRN1-202ENST00000392981 PIK3C2AO00443 1686 aa2.96□□□□□ -1.93
XRN1-202ENST00000392981 MYH13Q9UKX3 1938 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 TRPM2O94759 1503 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 ZNF724A8MTY0 619 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 PLIN3O60664 434 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 REM1O75628 298 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 DUS4LO95620 317 aaKnown RBP2.96□□□□□ -1.94
XRN1-202ENST00000392981 OGNP20774 298 aaKnown RBP2.96□□□□□ -1.94
XRN1-202ENST00000392981 CD38P28907 300 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 RBMXP38159 391 aaKnown RBP2.96□□□□□ -1.94
XRN1-202ENST00000392981 TTPAP49638 278 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 RAB5CP51148 216 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 STC1P52823 247 aa2.96□□□□□ -1.94
XRN1-202ENST00000392981 NDUFV3P56181 108 aaKnown RBP2.96□□□□□ -1.94
XRN1-202ENST00000392981 RPS23P62266 143 aaKnown RBP2.96□□□□□ -1.94
XRN1-202ENST00000392981 PRDX1Q06830 199 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms