RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ANGPT1Q15389 498 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SHHQ15465 462 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 GRK1Q15835 563 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TMEM183BQ1AE95 376 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 C5orf64Q2M2E5 130 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 RSPO1Q2MKA7 263 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TTLL9Q3SXZ7 439 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 Q5BKY6 102 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 LY6G6FQ5SQ64 297 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 N4BP2L1Q5TBK1 243 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 FBXW9Q5XUX1 488 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 RPL13AP3Q6NVV1 102 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 MED27Q6P2C8 311 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CERS6Q6ZMG9 384 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TMEM179Q6ZVK1 233 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SSX9Q7RTT3 188 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SMIM15Q7Z3B0 74 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ABHD12BQ7Z5M8 362 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SNX20Q7Z614 316 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 LRRC28Q86X40 367 aaPredicted RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TMEM183AQ8IXX5 376 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 STPG2Q8N412 459 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 C9orf62Q8N4C0 152 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 OR2M7Q8NG81 312 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 OR10R2Q8NGX6 335 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ACTL9Q8TC94 416 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ACTRT1Q8TDG2 376 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SRSF12Q8WXF0 261 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 IL22RA2Q969J5 263 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ZHX1-C8orf76Q96EF9 292 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PIK3IP1Q96FE7 263 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TSSK3Q96PN8 268 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 HBEGFQ99075 208 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 P2RX4Q99571 388 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 GGACTQ9BVM4 153 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 MND1Q9BWT6 205 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 NXF2Q9GZY0 626 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 CCDC59Q9P031 241 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 TMEM216Q9P0N5 145 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 IFNKQ9P0W0 207 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 METTL1Q9UBP6 276 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 LGALS13Q9UHV8 139 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 ING4Q9UNL4 249 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PSMD13Q9UNM6 376 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 PSG11Q9UQ72 335 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 RBMX2Q9Y388 322 aaKnown RBP2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SCN2AQ99250 2005 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 SLIT2O94813 1529 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 DOCK1Q14185 1865 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 DENND4AQ7Z401 1863 aa2.01□□□□□ -2.09
PTPRC-205ENST00000391970 DDX60LQ5H9U9 1706 aaKnown RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 TOGARAM1Q9Y4F4 1720 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 NHSL1Q5SYE7 1610 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 AHDC1Q5TGY3 1603 aaPredicted RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 A0A075B6Q4 140 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 A0A087WXM4 84 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 CENPXA8MT69 81 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 HIDE1A8MVS5 230 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 BTNL10A8MVZ5 291 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 F8VP50 259 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 H3BSA7 217 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 I3L4J1 428 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 DNASE2O00115 360 aaPredicted RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 KPNA3O00505 521 aaPredicted RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 TCAPO15273 167 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 SGCEO43556 437 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 CD5LO43866 347 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 POP7O75817 140 aaKnown RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 UPK1BO75841 260 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 GABARAPO95166 117 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 UTS2O95399 124 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 CLIC3O95833 236 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 SLC25A27O95847 323 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 GYPCP04921 128 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 SCGB1A1P11684 91 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 IL7P13232 177 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 MSR1P21757 451 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 CCNOP22674 350 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 OMGP23515 440 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 AK4P27144 223 aaPredicted RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 HSD11B1P28845 292 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 CASP1P29466 404 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 FOXN2P32314 431 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 HRH1P35367 487 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 RFC3P40938 356 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 MAGEA6P43360 314 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 SERPINB10P48595 397 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 RBP2P50120 134 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 AQP4P55087 323 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 KRTAP12-2P59991 146 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 RAB10P61026 200 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 CXCR4P61073 352 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 MAGOHP61326 146 aaKnown RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 DEFA6Q01524 100 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 HMGCS1Q01581 520 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 PAX5Q02548 391 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 IL18Q14116 193 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 MRPL23Q16540 153 aaKnown RBP2□□□□□ -2.09
PTPRC-205ENST00000391970 BSXQ3C1V8 233 aa2□□□□□ -2.09
PTPRC-205ENST00000391970 ALKBH6Q3KRA9 238 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms