RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ALKAL2Q6UX46 152 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 STPG3Q8N7X2 389 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 ZCCHC14Q8WYQ9 949 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 MYH10P35580 1976 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 FCGR3BO75015 233 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 EML2O95834 649 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 DAOP14920 347 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 COX7A1P24310 79 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 PAX5Q02548 391 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 SPINK14Q6IE38 97 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 FAM122CQ6P4D5 195 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 BCDIN3DQ7Z5W3 292 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 MARCH1Q8TCQ1 289 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 URB1O60287 2271 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 J3QR89 54 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 SPRY1O43609 319 aaPredicted RBP6.34□□□□□ -1.4
CCDC171-201ENST00000380701 CD3DP04234 171 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 HOXA6P31267 233 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 WNT3P56703 355 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 CLDN20P56880 219 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 IL24Q13007 206 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 RTP5Q14D33 572 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 ZNF260Q3ZCT1 412 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 SAP25Q8TEE9 199 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 SMIM7Q9BQ49 75 aa6.34□□□□□ -1.4
CCDC171-201ENST00000380701 ZNF629Q9UEG4 869 aaPredicted RBP6.34□□□□□ -1.4
CCDC171-201ENST00000380701 RAB27BO00194 218 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RER1O15258 196 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ADAM11O75078 769 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 SCGB1D1O95968 90 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 HAND1O96004 215 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 CST4P01036 141 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MBPP02686 304 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 CD1AP06126 327 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ACSM4P0C7M7 580 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 DGCR2P98153 550 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FABP5Q01469 135 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RIPPLY2Q5TAB7 128 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 PTX4Q96A99 478 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 JMJD8Q96S16 334 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 NAA60Q9H7X0 242 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RANGRFQ9HD47 186 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FAM60AQ9NP50 221 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 LIPGQ9Y5X9 500 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MYH7BA7E2Y1 1941 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MGST3O14880 152 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 SBK3P0C264 359 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 PDLIM4P50479 330 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 COL9A2Q14055 689 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 OR2B11Q5JQS5 317 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 TUSC5Q8IXB3 177 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 OR5AP2Q8NGF4 316 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 OR4A4PQ8NGN8 299 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 LAMA4Q16363 1823 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 PTPRZ1P23471 2315 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ZNF705GA8MUZ8 300 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 TRIM77I1YAP6 450 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 NUPL2O15504 423 aaKnown RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 GNG7O60262 68 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 CDC14BO60729 498 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FAM87AP0C7U9 286 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RAB5AP20339 215 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MMP16P51512 607 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 METAP1P53582 386 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 Q3ZCU0 254 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FAM27BQ5VT28 67 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RPUSD3Q6P087 351 aaKnown RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ETV3LQ6ZN32 361 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 LRFN3Q9BTN0 628 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 TECRQ9NZ01 308 aaKnown RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MTFP1Q9UDX5 166 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MIOXQ9UGB7 285 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 INSIG2Q9Y5U4 225 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ARAP2Q8WZ64 1704 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 BCL2L11O43521 198 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 MOSPD3O75425 235 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 SFT2D2O95562 160 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ACAA1P09110 424 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FAM106CPP0CH98 169 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 SLC25A4P12235 298 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 SSTR2P30874 369 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 SLC38A11Q08AI6 406 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ZNF816Q0VGE8 651 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 H3F3CQ6NXT2 135 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 UQCC3Q6UW78 93 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RHOUQ7L0Q8 258 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 NUDT8Q8WV74 236 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FLYWCH2Q96CP2 140 aaKnown RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 WDFY2Q96P53 400 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 STRCQ7RTU9 1775 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 FOXH1O75593 365 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 NQO2P16083 231 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 IGFBP6P24592 240 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 ATP5IP56385 69 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 RANP62826 216 aaKnown RBP6.33□□□□□ -1.4
CCDC171-201ENST00000380701 KLHDC1Q8N7A1 406 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
CCDC171-201ENST00000380701 LILRB1Q8NHL6 650 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms