RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FBXO17Q96EF6 278 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 TP53TG5Q9Y2B4 290 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 MYO7BQ6PIF6 2116 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 OR5H14A6NHG9 310 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 HNF4GQ14541 408 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 TEX30Q5JUR7 227 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 SLC25A31Q9H0C2 315 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 URGCP-MRPS24S4R325 110 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PRUNE2Q8WUY3 3088 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 ZIC3O60481 467 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PDCD6O75340 191 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PIGPP57054 158 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 C19orf57Q0VDD7 668 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PLA2G7Q13093 441 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PLGLAQ15195 96 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 FNDC7Q5VTL7 733 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 NAA40Q86UY6 237 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 FAM58AQ8N1B3 248 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 DUSP18Q8NEJ0 188 aa12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 PUS1Q9Y606 427 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHROOM1-203ENST00000378679 A0A0B4J293 547 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 ANKRD20A5PA0PJZ0 165 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 CLINT1Q14677 625 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 ZNF441Q8N8Z8 693 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 OR10Z1Q8NGY1 313 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 GMPPAQ96IJ6 420 aaPredicted RBP12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 PCDHGA9Q9Y5G4 932 aaKnown RBP12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 NKX6-3A6NJ46 265 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 MSTNO14793 375 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 NXPH3O95157 252 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 SNAPINO95295 136 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 CELA3AP09093 270 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 PTAFRP25105 342 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 PTGER4P35408 488 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 SMIM21Q3B7S5 101 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 NUFIP2Q7Z417 695 aaKnown RBP12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 A0A0G2JMM0 328 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 TRBV5-5A0A0J9YX44 114 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 A0A1W2PPB8 328 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 A0A1W2PRS3 328 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 KIR3DP1A8MWS1 328 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 AGFG2O95081 481 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 SLC16A13Q7RTY0 426 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 LYG2Q86SG7 212 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 OR14K1Q8NGZ2 314 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 PPP1R3CQ9UQK1 317 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 SCN8AQ9UQD0 1980 aa12.42□□□□□ -0.42
SHROOM1-203ENST00000378679 NPIPB13A6NJU9 1138 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 OR5B21A6NL26 309 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 NPIPB4C9JG80 1138 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 GPR31O00270 319 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 LMX1BO60663 402 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 MST1P26927 711 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 AVPI1Q5T686 147 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 GLDNQ6ZMI3 551 aaPredicted RBP12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 NPAS1Q99742 590 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 KLHDC3Q9BQ90 382 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 CHST5Q9GZS9 411 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 CHST6Q9GZX3 395 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 PRELID3BQ9Y3B1 194 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 MPC1Q9Y5U8 109 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 SHISA3A0PJX4 238 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 PRSS44E7EML9 344 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 CD80P33681 288 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 OR2B11Q5JQS5 317 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 RIPPLY2Q5TAB7 128 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 FAM214BQ7L5A3 538 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 MDP1Q86V88 176 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 CBLN2Q8IUK8 224 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 WNT2BQ93097 391 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 SEMA5BQ9P283 1151 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 IGKV1D-43A0A0B4J1Z2 117 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 IL5P05113 134 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 PSMB6P28072 239 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 RPS27AP62979 156 aaKnown RBP12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 UBA52P62987 128 aaKnown RBP12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 HLXQ14774 488 aaPredicted RBP12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 TCTEX1D2Q8WW35 142 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 MARC2Q969Z3 335 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 RNF150Q9ULK6 438 aa12.41□□□□□ -0.42
SHROOM1-203ENST00000378679 RRASP10301 218 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 RAG2P55895 527 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 TMEM268Q5VZI3 342 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 CLRN3Q8NCR9 226 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 TINAGQ9UJW2 476 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 STARD10Q9Y365 291 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 TECTAO75443 2155 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 CTDSPLO15194 276 aa12.4□□□□□ -0.42
SHROOM1-203ENST00000378679 NPIPB7O75200 414 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms