RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TSPO2Q5TGU0 170 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 DHRS7BQ6IAN0 325 aaPredicted RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 FBXL14Q8N1E6 418 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 FAM71E2Q8N5Q1 922 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 OR14L1PQ8NHC6 308 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 TOMM40LQ969M1 308 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 BSCL2Q96G97 398 aaPredicted RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 SGCZQ96LD1 299 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 WNT5BQ9H1J7 359 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 URB1O60287 2271 aaKnown RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 hCG_38984A0A1B0GV85 526 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 ZNF850A8MQ14 1090 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 MED6O75586 246 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 OR5AC1P0C628 307 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 GLI4P10075 376 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 IL32P24001 234 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 HOXA6P31267 233 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 HTR5AP47898 357 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 TMEM187Q14656 261 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 PDCD1Q15116 288 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 CNN3Q15417 329 aaKnown RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 BTNL8Q6UX41 500 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 CLEC9AQ6UXN8 241 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 AAED1Q7RTV5 226 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 ESX1Q8N693 406 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 ERGIC1Q969X5 290 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 BORCS8Q96FH0 119 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 DEPPQ9NTK1 212 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 NECAP2Q9NVZ3 263 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 ZNF587BE7ETH6 402 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 MBPP02686 304 aaPredicted RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 FOLR3P41439 243 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 TRA2AQ13595 282 aaKnown RBP eCLIP9.47□□□□□ -0.89
BEST1-201ENST00000378043 ABLIM2Q6H8Q1 611 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 HAGHLQ6PII5 290 aaPredicted RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 LHFPL2Q6ZUX7 228 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 LYZL2Q7Z4W2 148 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 PPP1R32Q7Z5V6 425 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 SKA3Q8IX90 412 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 OR10D3Q8NH80 312 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 RTN4IP1Q8WWV3 396 aaPredicted RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 GALNT14Q96FL9 552 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 CPNE2Q96FN4 548 aaPredicted RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 FOXB1Q99853 325 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 OR2H1Q9GZK4 316 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
BEST1-201ENST00000378043 LSM5Q9Y4Y9 91 aaKnown RBP9.47□□□□□ -0.89
BEST1-201ENST00000378043 COL27A1Q8IZC6 1860 aaPredicted RBP9.46□□□□□ -0.89
BEST1-201ENST00000378043 CCDC85CA6NKD9 419 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 FAM157AC9JC47 383 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.89
BEST1-201ENST00000378043 CD5P06127 495 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 ZNF728P0DKX0 622 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 TDGF1P13385 188 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 FXYD4P59646 89 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 FLI1Q01543 452 aaPredicted RBP9.46□□□□□ -0.89
BEST1-201ENST00000378043 PDZK1IP1Q13113 114 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 WIPI1Q5MNZ9 446 aaPredicted RBP9.46□□□□□ -0.89
BEST1-201ENST00000378043 OSR2Q8N2R0 312 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 NDRG3Q9UGV2 375 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 ST3GAL6Q9Y274 331 aa9.46□□□□□ -0.89
BEST1-201ENST00000378043 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 RNASEK-C17orf49H0YIS7 233 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 AGPAT2O15120 278 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 PDGFBP01127 241 aaPredicted RBP9.46□□□□□ -0.9
BEST1-201ENST00000378043 IFNA21P01568 189 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 P04436 131 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 EDN3P14138 238 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 NFYBP25208 207 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.9
BEST1-201ENST00000378043 OR8B8Q15620 311 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 PHLDA2Q53GA4 152 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 TRIM61Q5EBN2 209 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 EIF5AL1Q6IS14 154 aaKnown RBP9.46□□□□□ -0.9
BEST1-201ENST00000378043 CALHM1Q8IU99 346 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 ZNF100Q8IYN0 542 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 OR10Z1Q8NGY1 313 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 LYPD6BQ8NI32 183 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 GLYATL2Q8WU03 294 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 ABHD3Q8WU67 409 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 KCNE4Q8WWG9 221 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 ZNF845Q96IR2 970 aaPredicted RBP9.46□□□□□ -0.9
BEST1-201ENST00000378043 SLC2A9Q9NRM0 540 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 PRELID3BQ9Y3B1 194 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 TIMM10BQ9Y5J6 103 aa9.46□□□□□ -0.9
BEST1-201ENST00000378043 AHCTF1Q8WYP5 2266 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 ZDBF2Q9HCK1 2354 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 PINLYPA6NC86 204 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 JTBO76095 146 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 SNAPINO95295 136 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 FARS2O95363 451 aaKnown RBP9.45□□□□□ -0.9
BEST1-201ENST00000378043 SCGB1D2O95969 90 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 MMP7P09237 267 aaPredicted RBP9.45□□□□□ -0.9
BEST1-201ENST00000378043 CDCP2Q5VXM1 449 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 SLC23A3Q6PIS1 610 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 SLC22A25Q6T423 547 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 LRTM2Q8N967 370 aa9.45□□□□□ -0.9
BEST1-201ENST00000378043 CPEB3Q8NE35 698 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms