RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 LANCL2Q9NS86 450 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 WASF3Q9UPY6 502 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 CPAMD8Q8IZJ3 1885 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 CST7O76096 145 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 PTBP3O95758 552 aaKnown RBP13.88□□□□□ -0.19
CKAP4-201ENST00000378026 IGKV3-11P04433 115 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 CSNK1A1P48729 337 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 GNMTQ14749 295 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 GPR157Q5UAW9 335 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 DPPA2Q7Z7J5 298 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 LRRC18Q8N456 261 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 FAM210BQ96KR6 192 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 ATG101Q9BSB4 218 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 NAA60Q9H7X0 242 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 ANXA10Q9UJ72 324 aa13.88□□□□□ -0.19
CKAP4-201ENST00000378026 IGHV3-20A0A0C4DH32 117 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 FAM221BA6H8Z2 402 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 ZNF705GA8MUZ8 300 aaPredicted RBP13.87□□□□□ -0.19
CKAP4-201ENST00000378026 FAM180AQ6UWF9 173 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 FAM89BQ8N5H3 189 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 GPBAR1Q8TDU6 330 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 FGF14Q92915 247 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 PGAM5Q96HS1 289 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 CHST11Q9NPF2 352 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 CA14Q9ULX7 337 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 KIR2DS5A0A0G2JLQ3 304 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 A0A0G2JNG1 304 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 KIR2DS3K7RE56 304 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 TNFRSF10CO14798 259 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 SCAF4O95104 1147 aaKnown RBP13.87□□□□□ -0.19
CKAP4-201ENST00000378026 RPL23AP62750 156 aaKnown RBP13.87□□□□□ -0.19
CKAP4-201ENST00000378026 FZD2Q14332 565 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 KIR2DS5Q14953 304 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 PDCD1Q15116 288 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 PARM1Q6UWI2 310 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 SLC38A9Q8NBW4 561 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 PHOSPHO2Q8TCD6 241 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 WWTR1Q9GZV5 400 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 UNKLQ9H9P5 680 aaKnown RBP13.87□□□□□ -0.19
CKAP4-201ENST00000378026 PTPRSQ13332 1948 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 SERPINE3A8MV23 424 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 TCAPO15273 167 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 BCAT2O15382 392 aaPredicted RBP13.87□□□□□ -0.19
CKAP4-201ENST00000378026 LMO1P25800 156 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 DUSP1P28562 367 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 HAS2Q92819 552 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 MVB12AQ96EY5 273 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 SERINC1Q9NRX5 453 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 FOXD3Q9UJU5 478 aaPredicted RBP13.87□□□□□ -0.19
CKAP4-201ENST00000378026 TMED3Q9Y3Q3 217 aa13.87□□□□□ -0.19
CKAP4-201ENST00000378026 LTBP2Q14767 1821 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 CCDC187A0A096LP49 1063 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 IGHV5-51A0A0C4DH38 117 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 MSTNO14793 375 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 G0S2P27469 103 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 ICAM4Q14773 271 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 OR8G1Q15617 311 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 HIST2H3PS2Q5TEC6 136 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 ZNF880Q6PDB4 577 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 DTX1Q86Y01 620 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 CAPNS2Q96L46 248 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 GPHA2Q96T91 129 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 HIST1H2BLQ99880 126 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 CYTIPO60759 359 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 AKT2P31751 481 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 RAB11AP62491 216 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 FAM189A2Q15884 450 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 NKAIN1Q4KMZ8 207 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 DBX2Q6ZNG2 339 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 OR2C3Q8N628 320 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 OR14L1PQ8NHC6 308 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 MRGPRX1Q96LB2 322 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 SLC2A9Q9NRM0 540 aa13.86□□□□□ -0.19
CKAP4-201ENST00000378026 SEMA4FO95754 770 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 ZNF43P17038 809 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 FUT3P21217 361 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 GLIPR1P48060 266 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 DOK3Q7L591 496 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 TMEM171Q8WVE6 324 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 SLC25A31Q9H0C2 315 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 COPS7AQ9UBW8 275 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 HSF4Q9ULV5 492 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 TMEM131Q92545 1883 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 IGSF23A1L1A6 192 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 BLACEA4D250 179 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 SPRY1O43609 319 aaPredicted RBP13.85□□□□□ -0.19
CKAP4-201ENST00000378026 SSSCA1O60232 199 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 SFTPDP35247 375 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 APLNRP35414 380 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 FOXF1Q12946 379 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 PPA1Q15181 289 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 CRIP3Q6Q6R5 217 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 LIAT1Q6ZQX7 453 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 BATF2Q8N1L9 274 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 SLC35G3Q8N808 338 aa13.85□□□□□ -0.19
CKAP4-201ENST00000378026 ELOA3CA0A087WX78 387 aaPredicted RBP13.84□□□□□ -0.19
CKAP4-201ENST00000378026 A0A1W2PNR3 127 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms