RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 THSD4Q6ZMP0 1018 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 RAB1CQ92928 201 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 TJP1Q07157 1748 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 C9orf170A2RU37 121 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 RNF165Q6ZSG1 346 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 COX14Q96I36 57 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 OPN1MWP04001 364 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 OPN1MW2P0DN77 364 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 OPN1MW3P0DN78 364 aa16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 MAP1BP46821 2468 aaKnown RBP16.86■□□□□ 0.29
TBC1D4-201ENST00000377625 RAB32Q13637 225 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 BHLHA9Q7RTU4 235 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 OR6C3Q9NZP0 311 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 MAP1LC3B2A6NCE7 125 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 CD3EP07766 207 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 GNG4P50150 75 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 ST3GAL2Q16842 350 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 GGNBP1Q5YKI7 109 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 B3GNTL1Q67FW5 361 aaPredicted RBP16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 UQCC3Q6UW78 93 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 TMEM208Q9BTX3 173 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 MAP1LC3BQ9GZQ8 125 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 OR1A1Q9P1Q5 309 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 NAGKQ9UJ70 344 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 WSB1Q9Y6I7 421 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 CYR61O00622 381 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 LANCL1O43813 399 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 TMEM65Q6PI78 240 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 C19orf35Q6ZS72 473 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 OR6X1Q8NH79 312 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 FAM24AA6NFZ4 105 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 CLEC9AQ6UXN8 241 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 DOK5Q9P104 306 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 SPINK4O60575 86 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 RAC3P60763 192 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 CD300LDQ6UXZ3 194 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 C17orf47Q8NEP4 570 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 MPC1Q9Y5U8 109 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 TAF1P21675 1872 aa16.85■□□□□ 0.29
TBC1D4-201ENST00000377625 OR4A8P0C604 315 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 OR5AC1P0C628 307 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 SCAND1P57086 179 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 RNASEKQ6P5S7 137 aaKnown RBP16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 EID2BQ96D98 161 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 VPS25Q9BRG1 176 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 NAT8BQ9UHF3 227 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 FAM157AC9JC47 383 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 TO15178 435 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 BHLHA15Q7RTS1 189 aaPredicted RBP16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 ZNF683Q8IZ20 524 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 GABRA1P14867 456 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 PRSS12P56730 875 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 SKP2Q13309 424 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 GAMTQ14353 236 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 ZIC1Q15915 447 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 RNF212Q495C1 297 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 TGIF2LXQ8IUE1 241 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 ASB10Q8WXI3 467 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 MMP26Q9NRE1 261 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 ADAMTSL3P82987 1691 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 A0A1W2PRD5 423 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 A0A1W2PRF3 423 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 A0A1W2PRM7 423 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 NUBPLQ8TB37 319 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 TNFRSF19Q9NS68 423 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 MYO7AQ13402 2215 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 PHOX2AO14813 284 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 RANP62826 216 aaKnown RBP16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 XAF1Q6GPH4 301 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 ZNF66Q6ZN08 573 aa16.84■□□□□ 0.29
TBC1D4-201ENST00000377625 IL9P15248 144 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 GALR1P47211 349 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 HMGA2P52926 109 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 SSX1Q16384 188 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 K7ESF4 209 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 CDC42EP2O14613 210 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 NQO2P16083 231 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 CSF2RBP32927 897 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 HNRNPA3P51991 378 aaKnown RBP16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 OR2Y1Q8NGV0 311 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 GLRX2Q9NS18 164 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 AMDHD2Q9Y303 409 aa16.83■□□□□ 0.29
TBC1D4-201ENST00000377625 MS4A18H0YCH9 400 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 SCGB1C2P0DMR2 95 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 TNXAQ16473 311 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 TMEM241Q24JQ0 296 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 MS4A18Q3C1V0 323 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 MOGAT2Q3SYC2 334 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 OR8B12Q8NGG6 310 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 TMEM37Q8WXS4 190 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 TCFL5Q9UL49 500 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 TTC3P53804 2025 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 SP1P08047 785 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 RASL10BQ96S79 203 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 SLC25A22Q9H936 323 aa16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 SIRT3Q9NTG7 399 aaPredicted RBP16.83■□□□□ 0.28
TBC1D4-201ENST00000377625 TRAV38-1A0A0B4J264 116 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms