RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SRSF4Q08170 494 aaKnown RBP13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 SLAMF9Q96A28 289 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 KIF25Q9UIL4 384 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 ARHGAP21Q5T5U3 1957 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 LILRA1O75019 489 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 FCGR3AP08637 254 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 CD46P15529 392 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 RPS2P15880 293 aaKnown RBP13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 PSMB6P28072 239 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 DUSP1P28562 367 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 CCL11P51671 97 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 ZNF766Q5HY98 468 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 SPATA46Q5T0L3 261 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 RGS7BPQ6MZT1 257 aaPredicted RBP13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 Q6ZPA2 131 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 KCNRGQ8N5I3 272 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 BOLLQ8N9W6 283 aaKnown RBP13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 ASB13Q8WXK3 278 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 RRNAD1Q96FB5 475 aaKnown RBP13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 LINC00470Q9BZP3 86 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 PRDM14Q9GZV8 571 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 RGCCQ9H4X1 137 aa13.79□□□□□ -0.2
CNKSR1-202ENST00000374253 ZNF292O60281 2723 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 HAAOP46952 286 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 PRDX4Q13162 271 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 TMEM65Q6PI78 240 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 SLC22A25Q6T423 547 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 MRPL21Q7Z2W9 205 aaKnown RBP13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 BCO1Q9HAY6 547 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 A0A0D9SG52 128 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 CEACAM18A8MTB9 384 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 F5H0A9 414 aaPredicted RBP13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 SLC25A4P12235 298 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 BCL3P20749 454 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 SP6Q3SY56 376 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 ACOT7LQ6ZUV0 252 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 RFPL4BQ6ZWI9 263 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 GCNT2Q8N0V5 402 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 INO80EQ8NBZ0 244 aaPredicted RBP13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 REG4Q9BYZ8 158 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 ZNF442Q9H7R0 627 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 OR5AC2Q9NZP5 309 aa13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 C14orf166Q9Y224 244 aaKnown RBP13.78□□□□□ -0.2
CNKSR1-202ENST00000374253 DAZAP2Q15038 168 aaPredicted RBP13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 COLCA1Q6ZS62 124 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 ZFP62Q8NB50 900 aaPredicted RBP13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 OR5M9Q8NGP3 310 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 HPSE2Q8WWQ2 592 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 SPSB4Q96A44 273 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 CPNE2Q96FN4 548 aaPredicted RBP13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 LINC00052Q96N35 136 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 RNF126Q9BV68 326 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF552Q9H707 407 aaPredicted RBP13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 AKAP13Q12802 2813 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 ESPL1Q14674 2120 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 RP1L1Q8IWN7 2480 aaPredicted RBP13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 MSGN1A6NI15 193 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 BCL2L11O43521 198 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 CRYZL1O95825 349 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 S100A10P60903 97 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF488Q96MN9 340 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 REPIN1Q9BWE0 567 aaKnown RBP13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF391Q9UJN7 358 aa13.77□□□□□ -0.21
CNKSR1-202ENST00000374253 CACNA1GO43497 2377 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 IGHV3-64DA0A0J9YX35 117 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 TEX13DA0A0J9YY54 714 aaPredicted RBP13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 SIGLEC5O15389 551 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 OR2F2O95006 317 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 FTH1P19P0C7X4 201 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 WT1P19544 449 aaPredicted RBP13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 IL32P24001 234 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 OR2F1Q13607 317 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 PHLDA2Q53GA4 152 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 ASCL4Q6XD76 172 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 SUMF1Q8NBK3 374 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 WDYHV1Q96HA8 205 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 SCGB3A2Q96PL1 93 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 TNRC6AQ8NDV7 1962 aaKnown RBP13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 GVINP1Q7Z2Y8 2422 aa13.76□□□□□ -0.21
CNKSR1-202ENST00000374253 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 IL18BPO95998 194 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 RBM11P57052 281 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 RAB32Q13637 225 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 ARL6IP1Q15041 203 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 C1QTNF12Q5T7M4 302 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 TMEM200AQ86VY9 491 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 KCNMB2Q9Y691 235 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 A0A0B4J2A0 478 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 MFSD2BA6NFX1 497 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 ZSCAN5BA6NJL1 495 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 SLC22A20A6NK97 555 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF724A8MTY0 619 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF732B4DXR9 585 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 PDZD9Q8IXQ8 264 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms