RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 EXTL1Q92935 676 aa6.84□□□□□ -1.31
HERC4-202ENST00000373700 ZNF524Q96C55 264 aa6.84□□□□□ -1.31
HERC4-202ENST00000373700 ZNF285Q96NJ3 590 aa6.84□□□□□ -1.31
HERC4-202ENST00000373700 PTPRSQ13332 1948 aa6.84□□□□□ -1.31
HERC4-202ENST00000373700 WDFY4Q6ZS81 3184 aa6.84□□□□□ -1.32
HERC4-202ENST00000373700 OR6C6A6NF89 314 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SERPINE3A8MV23 424 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 C9orf172C9J069 976 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SNAPINO95295 136 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 ONECUT2O95948 504 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 CPN1P15169 458 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 CA6P23280 308 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 EDDM3BP56851 147 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SIGIRRQ6IA17 410 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 TFAP2EQ6VUC0 442 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SFT2D1Q8WV19 159 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 ZNF837Q96EG3 531 aaPredicted RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 GFI1Q99684 422 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 GNG12Q9UBI6 72 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 ZNF629Q9UEG4 869 aaPredicted RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 CLDN16Q9Y5I7 305 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 ZNF816-ZNF321PA0A0X1KG74 233 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 PLSCR5A0PG75 271 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 TRAF3IP2O43734 574 aaPredicted RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 KLF7O75840 302 aaPredicted RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 DUS4LO95620 317 aaKnown RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 IGHV3-13P01766 116 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 IGHV3-7P01780 117 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 CNR1P21554 472 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 BMP5P22003 454 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SSBP1Q04837 148 aaKnown RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 TUSC1Q2TAM9 212 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 LRRC75AQ8NAA5 344 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 NFAM1Q8NET5 270 aaPredicted RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 OR5AP2Q8NGF4 316 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 ANGPTL6Q8NI99 470 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 WNT2BQ93097 391 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 PIGMQ9H3S5 423 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 EDARQ9UNE0 448 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 B4E171 279 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 CLDN1O95832 211 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 IFNA17P01571 189 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 S100A2P29034 98 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 TSPAN7P41732 249 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 RPL23AP62750 156 aaKnown RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 RAB35Q15286 201 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 HIKESHIQ53FT3 197 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 RPL7L1Q6DKI1 246 aaKnown RBP6.83□□□□□ -1.32
HERC4-202ENST00000373700 ADAM5Q6NVV9 412 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 TMEM251Q8N6I4 163 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SUMF2Q8NBJ7 301 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 OR2G3Q8NGZ4 309 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 OR10J5Q8NHC4 309 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 KCNE4Q8WWG9 221 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SGK3Q96BR1 496 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 TIMP4Q99727 224 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 SOSTQ9BQB4 213 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 PECRQ9BY49 303 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 G6PC2Q9NQR9 355 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 ZFP57Q9NU63 452 aa6.83□□□□□ -1.32
HERC4-202ENST00000373700 A0A0U1RQK1 487 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 CEBPZOSA8MTT3 80 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 C1orf196B1AJZ1 125 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 OR5AC1P0C628 307 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 PGA4P0DJD7 388 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 PGA3P0DJD8 388 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 IAPPP10997 89 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 TBPP20226 339 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 FUT3P21217 361 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 RAB5BP61020 215 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 HAGHQ16775 308 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 MRPL14Q6P1L8 145 aaKnown RBP6.82□□□□□ -1.32
HERC4-202ENST00000373700 LHFPL2Q6ZUX7 228 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 ZDHHC23Q8IYP9 409 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 ZDHHC22Q8N966 263 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 ADPRHL1Q8NDY3 354 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 BPIFCQ8NFQ6 507 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 OR8U1Q8NH10 309 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 ST7LQ8TDW4 575 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 MUCL1Q96DR8 90 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 GPR137Q96N19 417 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 DHRS9Q9BPW9 319 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 NKX6-2Q9C056 277 aaPredicted RBP6.82□□□□□ -1.32
HERC4-202ENST00000373700 LPAR5Q9H1C0 372 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 SLC25A32Q9H2D1 315 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 GPR27Q9NS67 375 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 CHCHD2Q9Y6H1 151 aaPredicted RBP6.82□□□□□ -1.32
HERC4-202ENST00000373700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.82□□□□□ -1.321e-6■■■■□ 23.2
HERC4-202ENST00000373700 ANKRD11Q6UB99 2663 aaPredicted RBP6.82□□□□□ -1.32
HERC4-202ENST00000373700 SCAND1P57086 179 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 SSX9Q7RTT3 188 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 C1QL2Q7Z5L3 287 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 ZFP62Q8NB50 900 aaPredicted RBP6.82□□□□□ -1.32
HERC4-202ENST00000373700 KIRREL1Q96J84 757 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 SRXN1Q9BYN0 137 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 TTTY12Q9BZ98 90 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 NUP210Q8TEM1 1887 aaPredicted RBP6.82□□□□□ -1.32
HERC4-202ENST00000373700 RPS10-NUDT3A0A1W2PQS6 291 aa6.82□□□□□ -1.32
HERC4-202ENST00000373700 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms