RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 SMCHD1A6NHR9 2005 aa12.85□□□□□ -0.35
UBR2-201ENST00000372899 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
UBR2-201ENST00000372899 DOK1Q99704 481 aa12.85□□□□□ -0.35
UBR2-201ENST00000372899 MPDU1O75352 247 aa12.85□□□□□ -0.35
UBR2-201ENST00000372899 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
UBR2-201ENST00000372899 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 RFESDQ8TAC1 157 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 FGF14Q92915 247 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 CLN8Q9UBY8 286 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 POLR2AP24928 1970 aaKnown RBP12.84□□□□□ -0.35
UBR2-201ENST00000372899 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 PRKNO60260 465 aaPredicted RBP12.84□□□□□ -0.35
UBR2-201ENST00000372899 SNRPNP63162 240 aaKnown RBP12.84□□□□□ -0.35
UBR2-201ENST00000372899 MRGPRDQ8TDS7 321 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 NUDT16L1Q9BRJ7 211 aaKnown RBP12.84□□□□□ -0.35
UBR2-201ENST00000372899 MSL2Q9HCI7 577 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 FABP4P15090 132 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 COPS9Q8WXC6 57 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 SLC25A46Q96AG3 418 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 SMAD7O15105 426 aaKnown RBP12.84□□□□□ -0.35
UBR2-201ENST00000372899 PTBP1P26599 531 aaKnown RBP eCLIP12.84□□□□□ -0.356e-7■■■■■ 34.6
UBR2-201ENST00000372899 CLDN18P56856 261 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 HGDQ93099 445 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 MCHR2Q969V1 340 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 OR5M11Q96RB7 305 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 SMOC1Q9H4F8 434 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 SSC5DA1L4H1 1573 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 OOEPA6NGQ2 149 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 SULT1A2P50226 295 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 HERPUD1Q15011 391 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 NUDCD2Q8WVJ2 157 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 WNT9BO14905 357 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 NME1P15531 152 aaKnown RBP12.84□□□□□ -0.35
UBR2-201ENST00000372899 TFPI2P48307 235 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 HIST1H3AP68431 136 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 ZNF841Q6ZN19 808 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 C16orf92Q96LL3 132 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
UBR2-201ENST00000372899 MEX3AA1L020 520 aaKnown RBP12.83□□□□□ -0.35
UBR2-201ENST00000372899 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.35
UBR2-201ENST00000372899 EML2O95834 649 aa12.83□□□□□ -0.35
UBR2-201ENST00000372899 SEC11CQ9BY50 192 aa12.83□□□□□ -0.35
UBR2-201ENST00000372899 ERRFI1Q9UJM3 462 aaPredicted RBP12.83□□□□□ -0.35
UBR2-201ENST00000372899 IGKV3D-15A0A087WSY6 115 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 A0A087WUJ7 227 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 LALBAP00709 142 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 IGKV3-15P01624 115 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 CALCRP30988 508 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 FCN2Q15485 313 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 MOGAT2Q3SYC2 334 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 OR10A7Q8NGE5 316 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 MS4A5Q9H3V2 200 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 MAST2Q6P0Q8 1798 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 SVILO95425 2214 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 APELAP0DMC3 54 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 FLYWCH2Q96CP2 140 aaKnown RBP12.83□□□□□ -0.36
UBR2-201ENST00000372899 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
UBR2-201ENST00000372899 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 PARP11Q9NR21 331 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 EPHA8P29322 1005 aaPredicted RBP12.83□□□□□ -0.36
UBR2-201ENST00000372899 LIMK1P53667 647 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 PRSS8Q16651 343 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 ANKRD37Q7Z713 158 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 D2HGDHQ8N465 521 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 GPR137Q96N19 417 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 OR2A5Q96R48 311 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 MRPS16Q9Y3D3 137 aaKnown RBP12.83□□□□□ -0.36
UBR2-201ENST00000372899 CST7O76096 145 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 LGALSLQ3ZCW2 172 aaPredicted RBP12.83□□□□□ -0.36
UBR2-201ENST00000372899 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 ANKRD31Q8N7Z5 1873 aa12.83□□□□□ -0.36
UBR2-201ENST00000372899 ACTL6AO96019 429 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 HLA-GP17693 338 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 PRSS12P56730 875 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 ZBTB37Q5TC79 503 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 C2CD4CQ8TF44 421 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 METTL26Q96S19 204 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 ZNF665Q9H7R5 613 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 IGSF23A1L1A6 192 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 FAM106CPP0CH98 169 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 SLC6A12P48065 614 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 CAMPP49913 170 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
UBR2-201ENST00000372899 MYO7AQ13402 2215 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 MYO16Q9Y6X6 1858 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 KLKB1P03952 638 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 RPS4Y1P22090 263 aaKnown RBP12.82□□□□□ -0.36
UBR2-201ENST00000372899 DMRTC1Q5HYR2 192 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 NANOGP1Q8N7R0 232 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 CCL2P13500 99 aa12.82□□□□□ -0.36
UBR2-201ENST00000372899 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms