RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 FUT3P21217 361 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 RBMXP38159 391 aaKnown RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 LBX1P52954 281 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FGF8P55075 233 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SCAND1P57086 179 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 CARD18P57730 90 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF121P58317 390 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 MLF1P58340 268 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TAS2R60P59551 318 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 UBE2KP61086 200 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 RND3P61587 244 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SSBP1Q04837 148 aaKnown RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 ISXQ2M1V0 245 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 CHRFAM7AQ494W8 412 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PHF19Q5T6S3 580 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 CRIP3Q6Q6R5 217 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 PARM1Q6UWI2 310 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 Q6ZSR6 202 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 C8orf86Q6ZUL3 223 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 C9orf40Q8IXQ3 194 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 HIST3H2BBQ8N257 126 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 OR10AD1Q8NGE0 317 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 FNDC9Q8TBE3 224 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 HOXB13Q92826 284 aaPredicted RBP4.74□□□□□ -1.65
ATG4A-204ENST00000372246 WDR92Q96MX6 357 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 WWTR1Q9GZV5 400 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 ADAM19Q9H013 955 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 SLC35B3Q9H1N7 401 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 S1PR5Q9H228 398 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TXNIPQ9H3M7 391 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TBX21Q9UL17 535 aa4.74□□□□□ -1.65
ATG4A-204ENST00000372246 TRAV36DV7A0A075B6V5 113 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CCDC187A0A096LP49 1063 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 A0A0J9YY10 115 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SHISA7A6NL88 538 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 F5H5K5 113 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 HSD17B6O14756 317 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SLC31A2O15432 143 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 F10P00742 488 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 IFNA17P01571 189 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 DANCRP0C864 163 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 C5AR1P21730 350 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 BMP5P22003 454 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 TUBG1P23258 451 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 FCARP24071 287 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 IL2RGP31785 369 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 RBP2P50120 134 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 RAB5CP51148 216 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 PIGPP57054 158 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CYCSP99999 105 aaKnown RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 OR8G1Q15617 311 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 TAF9Q16594 264 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 KRTCAP3Q53RY4 240 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF440Q8IYI8 595 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF610Q8N9Z0 462 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SLC24A4Q8NFF2 622 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 OR1J1Q8NGS3 322 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 OR2AJ1Q8NGZ0 328 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 NAT6Q93015 286 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SHDQ96IW2 340 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 C5orf34Q96MH7 638 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 TBL1XR1Q9BZK7 514 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SOHLH2Q9NX45 425 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 GFOD1Q9NXC2 390 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 PRODH2Q9UF12 536 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 B3GALT5Q9Y2C3 310 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 KIAA2026Q5HYC2 2103 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 IGHV5-51A0A0C4DH38 117 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 A0A1W2PQF6 199 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM210A6NLX4 147 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF724A8MTY0 619 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 NPIPA5E9PKD4 350 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CLDN4O14493 209 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 PHYHO14832 338 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 PLRG1O43660 514 aaKnown RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 EFNA2O43921 213 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CYTIPO60759 359 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 KLF8O95600 359 aaPredicted RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 HLA-HP01893 362 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 PGA3P0DJD8 388 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 DEFA4P12838 97 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 LYL1P12980 280 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 FPR2P25090 351 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CFPP27918 469 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 WNT5AP41221 380 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CSNK1A1P48729 337 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 FBXW4P57775 412 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 HHEXQ03014 270 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 FUT7Q11130 342 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SSX2Q16385 188 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SGCBQ16585 318 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SPSB3Q6PJ21 355 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 Q6ZPA2 131 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 Q7L0L9 218 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 NUP54Q7Z3B4 507 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 LHFPL1Q86WI0 220 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SULF2Q8IWU5 870 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms