RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZFP64Q9NPA5 681 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 SSSCA1O60232 199 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 C21orf58P58505 322 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 GPNMBQ14956 572 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 TVP23CQ96ET8 276 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 ACTR3CQ9C0K3 210 aaPredicted RBP11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 KCNE3Q9Y6H6 103 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 SPINT1O43278 529 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 GNG7O60262 68 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLC25A5P05141 298 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF117Q03924 483 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR4F5Q8NH21 305 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 CMTM2Q8TAZ6 248 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 MARCH1Q8TCQ1 289 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 ADAMTS17Q8TE56 1095 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 NUDCD2Q8WVJ2 157 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 FOXJ2Q9P0K8 574 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 STARD6P59095 220 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 C11orf87Q6NUJ2 197 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 FBXL14Q8N1E6 418 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 NECAP1Q8NC96 275 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR10W1Q8NGF6 305 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 A0A087WUJ7 227 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR51F2Q8NH61 342 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
RAPGEF1-201ENST00000372189 ANKRD61A6NGH8 418 aa11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 LRP3O75074 770 aa11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 FGF9P31371 208 aaPredicted RBP11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 INSM1Q01101 510 aaPredicted RBP11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 ELFN2Q5R3F8 820 aa11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 KLK11Q9UBX7 282 aa11.9□□□□□ -0.51
RAPGEF1-201ENST00000372189 MEIKINA0A087WXM9 373 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 IGHV4-34P06331 123 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZNF626Q68DY1 528 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 BATF2Q8N1L9 274 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 DHODHQ02127 395 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 CEACAM16Q2WEN9 425 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 VN1R4Q7Z5H5 301 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 ADGRG3Q86Y34 549 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 AMER3Q8N944 861 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR2M3Q8NG83 312 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 FOCADQ5VW36 1801 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 DOCK5Q9H7D0 1870 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 ASPDHA6ND91 283 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 WDR1O75083 606 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 NRASP01111 189 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 GNB2P62879 340 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 DEFB108BQ8NET1 73 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 PLA2G12AQ9BZM1 189 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 CASP8AP2Q9UKL3 1982 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 SDCBPO00560 298 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 PNLIPP16233 465 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 CKS1BP61024 79 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 SSX8Q7RTT4 187 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 NXF2Q9GZY0 626 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 RNASEK-C17orf49H0YIS7 233 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 PYCARD-AS1I3L0S3 204 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 RAG2P55895 527 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 FAM3AP98173 230 aa11.89□□□□□ -0.51
RAPGEF1-201ENST00000372189 SERTM1A2A2V5 107 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZIC1Q15915 447 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 SLC16A12Q6ZSM3 486 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 FOXB1Q99853 325 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 TMPRSS13Q9BYE2 586 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 CRYBB2P43320 205 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 OR3A1P47881 315 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 KTI12Q96EK9 354 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 DERL3Q96Q80 235 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 ALKBH3Q96Q83 286 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 SIGMAR1Q99720 223 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 GPR84Q9NQS5 396 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 FOXJ3Q9UPW0 622 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 STARD10Q9Y365 291 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 IGHV3-64DA0A0J9YX35 117 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 GPR12P47775 334 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 PNLIPRP3Q17RR3 467 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 ZDHHC23Q8IYP9 409 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 LHX4Q969G2 390 aa11.88□□□□□ -0.51
RAPGEF1-201ENST00000372189 MMP26Q9NRE1 261 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms