RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 RFPL4AA6NLU0 287 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 RFPL4AL1F8VTS6 287 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 CDIPTO14735 213 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 GFRA3O60609 400 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 FTH1P19P0C7X4 201 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 CTLA4P16410 223 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 AMTP48728 403 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 PNLIPRP3Q17RR3 467 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 COL13A1Q5TAT6 717 aaPredicted RBP7.58□□□□□ -1.2
ABCA4-201ENST00000370225 TMUB1Q9BVT8 246 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 MSL2Q9HCI7 577 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 PRR13Q9NZ81 148 aa7.58□□□□□ -1.2
ABCA4-201ENST00000370225 A0A1W2PPQ1 181 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ASPDHA6ND91 283 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 DNPH1O43598 174 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ARG1P05089 322 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 PDZK1IP1Q13113 114 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 NCR3LG1Q68D85 454 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 WDR89Q96FK6 387 aaPredicted RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 TRAPPC4Q9Y296 219 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 KCNMB2Q9Y691 235 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 MASP2O00187 686 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CELA2AP08217 269 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 FGF2P09038 288 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 REG1BP48304 166 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 EVX1P49640 407 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 BTG1P62324 171 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CD226Q15762 336 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CLEC9AQ6UXN8 241 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 OR8B12Q8NGG6 310 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 COX14Q96I36 57 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CNTD2Q9H8S5 307 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 C12orf10Q9HB07 376 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 PTPRZ1P23471 2315 aaPredicted RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CASP8AP2Q9UKL3 1982 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 KCNE1BA0A087WTH5 132 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ARRDC5A6NEK1 342 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ZNF716A6NP11 495 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 DGAT2L6Q6ZPD8 337 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 GRAMD2BQ96HH9 432 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 OPN3Q9H1Y3 402 aaPredicted RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CACNA1CQ13936 2221 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 C3orf85A0A1B0GTC6 90 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 NKX2-8O15522 239 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 RAB7AP51149 207 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 KRTDAPP60985 99 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 SKP2Q13309 424 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 HGDQ93099 445 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 SIRT5Q9NXA8 310 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 NTMQ9P121 344 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 SPAG17Q6Q759 2223 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 A0A1W2PPE3 182 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 C21orf140B9A014 251 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 LALBAP00709 142 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 HOXC4P09017 264 aaPredicted RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 TUSC1Q2TAM9 212 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 DCAF10Q5QP82 559 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 CALHM3Q86XJ0 350 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 TMEM229BQ8NBD8 167 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 OR52L2PQ8NGH6 319 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 TMEM171Q8WVE6 324 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 DUSP15Q9H1R2 295 aaPredicted RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 ZNF768Q9H5H4 540 aaKnown RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 FGF20Q9NP95 211 aaPredicted RBP7.57□□□□□ -1.2
ABCA4-201ENST00000370225 AUP1Q9Y679 476 aa7.57□□□□□ -1.2
ABCA4-201ENST00000370225 SLC17A2O00624 439 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 PRF1P14222 555 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
ABCA4-201ENST00000370225 IGFBP7Q16270 282 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 CACNG5Q9UF02 275 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 BCORQ6W2J9 1755 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 TRAV39A0A0B4J263 110 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 SMAD7O15105 426 aaKnown RBP7.56□□□□□ -1.2
ABCA4-201ENST00000370225 PTBP1P26599 531 aaKnown RBP eCLIP7.56□□□□□ -1.2
ABCA4-201ENST00000370225 PAX5Q02548 391 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 RNFT1Q5M7Z0 435 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 SH2D5Q6ZV89 423 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 BHLHA9Q7RTU4 235 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 DCAF16Q9NXF7 216 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 IGLV3-16A0A075B6K0 115 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 ADAM10O14672 748 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 HAND1O96004 215 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 ASAH1Q13510 395 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 BAK1Q16611 211 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 NSUN5P2Q63ZY6 315 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 GVQW1Q8N7I0 195 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 MS4A7Q9GZW8 240 aaPredicted RBP7.56□□□□□ -1.2
ABCA4-201ENST00000370225 PLEKHA2Q9HB19 425 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 EXOGQ9Y2C4 368 aaKnown RBP7.56□□□□□ -1.2
ABCA4-201ENST00000370225 FUCA1P04066 466 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 HIST1H1DP16402 221 aaKnown RBP7.56□□□□□ -1.2
ABCA4-201ENST00000370225 WNT3P56703 355 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 OR10AC1Q8NH08 325 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 PIGMQ9H3S5 423 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 MIA3Q5JRA6 1907 aa7.56□□□□□ -1.2
ABCA4-201ENST00000370225 A0A1W2PN81 502 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms