RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 BOD1Q96IK1 185 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 SHARPINQ9H0F6 387 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 ZMAT3Q9HA38 289 aaKnown RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 ELL3Q9HB65 397 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 NEK6Q9HC98 313 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 KLK11Q9UBX7 282 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 ZNF391Q9UJN7 358 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 POU2F3Q9UKI9 436 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 MALRD1Q5VYJ5 2156 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 METTL21EPA6NDL7 271 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 DHRS7CA6NNS2 312 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 CENPXA8MT69 81 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 GMDSO60547 372 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 NRASP01111 189 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 SERPINA5P05154 406 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 VEGFCP49767 419 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 MTCP1P56278 107 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 MRPS10P82664 201 aaKnown RBP8.46□□□□□ -1.05
TPM3-210ENST00000368530 KLF9Q13886 244 aaPredicted RBP8.46□□□□□ -1.05
TPM3-210ENST00000368530 GK2Q14410 553 aaPredicted RBP8.46□□□□□ -1.05
TPM3-210ENST00000368530 CNN3Q15417 329 aaKnown RBP8.46□□□□□ -1.05
TPM3-210ENST00000368530 TBC1D28Q2M2D7 210 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 SLC22A6Q4U2R8 563 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 CLVS2Q5SYC1 327 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 FAM120AOSQ5T036 256 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 SPATA46Q5T0L3 261 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 PLCXD3Q63HM9 321 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 CRIP3Q6Q6R5 217 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 PLET1Q6UQ28 207 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 IL17RELQ6ZVW7 336 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 RFPL4BQ6ZWI9 263 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 C1QL2Q7Z5L3 287 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 RTN4RL2Q86UN3 420 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 CDH26Q8IXH8 852 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 TMEM104Q8NE00 496 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 SPSB4Q96A44 273 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 NICN1Q9BSH3 213 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 GPR160Q9UJ42 338 aa8.46□□□□□ -1.05
TPM3-210ENST00000368530 ELF5Q9UKW6 265 aaPredicted RBP8.46□□□□□ -1.05
TPM3-210ENST00000368530 IGKV1-27A0A075B6S5 117 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 IGHV4-61A0A0C4DH41 118 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ZNF816-ZNF321PA0A0X1KG74 233 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ZNF850A8MQ14 1090 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 TMEM14DPA8MWL7 114 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ATP6V1G2-DDX39BF2Z307 99 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 SPRY1O43609 319 aaPredicted RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 CDC14BO60729 498 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 FAM157BP0CG42 384 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 TMEM225BP0DP42 221 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ZNF14P17017 642 aaPredicted RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 SERPINA2P20848 420 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 PRKACBP22694 351 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 PRSS3P35030 304 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 BTCP35070 178 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 PTGFRP43088 359 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 GZMKP49863 264 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 CCR6P51684 374 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 CAPZA1P52907 286 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 RAB25P57735 213 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 OR8B8Q15620 311 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 OR2W3Q7Z3T1 314 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ZNF554Q86TJ5 538 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 C17orf78Q8N4C9 275 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 BHLHE23Q8NDY6 225 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 C1orf162Q8NEQ5 155 aaPredicted RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 C15orf40Q8WUR7 153 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 DVL3Q92997 716 aaPredicted RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 PTX4Q96A99 478 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 BORCS8Q96FH0 119 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 C1orf147Q96MC9 270 aaPredicted RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 ZNF75AQ96N20 296 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 S100A13Q99584 98 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 PAPOLGQ9BWT3 736 aaKnown RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 TMEM59Q9BXS4 323 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 CDH20Q9HBT6 801 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ATP23Q9Y6H3 246 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 ARFGEF3Q5TH69 2177 aa8.45□□□□□ -1.06
TPM3-210ENST00000368530 HEATR1Q9H583 2144 aaKnown RBP8.45□□□□□ -1.06
TPM3-210ENST00000368530 TRAV6A0A075B6T7 132 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 A0A0A6YYD4 124 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 TMEM235A6NFC5 223 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 NDUFS8O00217 210 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 ANGPTL7O43827 346 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 RBBP9O75884 186 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 ALX3O95076 343 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 HNRNPCP07910 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
TPM3-210ENST00000368530 SRD5A1P18405 259 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 GIFP27352 417 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 CD300CQ08708 224 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 PCGF3Q3KNV8 242 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 TMEM255AQ5JRV8 349 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 C1QTNF12Q5T7M4 302 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 SFRP4Q6FHJ7 346 aaPredicted RBP8.44□□□□□ -1.06
TPM3-210ENST00000368530 FAAP20Q6NZ36 180 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 KCNG3Q8TAE7 436 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 UBASH3BQ8TF42 649 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 UPRTQ96BW1 309 aa8.44□□□□□ -1.06
TPM3-210ENST00000368530 CYYR1Q96J86 154 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms