RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 HKR1P10072 659 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 ADCYAP1P18509 176 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF169Q14929 603 aaPredicted RBP15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 PABPC1L2AQ5JQF8 200 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 LHFPL2Q6ZUX7 228 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 A0A096LPE4 126 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 A0A1W2PPZ6 126 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 CRYM-AS1A6NIL9 109 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 LRP3O75074 770 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 FBXO24O75426 580 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 F12P00748 615 aaPredicted RBP15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 IGHEP01854 428 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 CCL2P13500 99 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 PDZK1IP1Q13113 114 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 ABLIM2Q6H8Q1 611 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 SLC22A25Q6T423 547 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 CALHM1Q8IU99 346 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 PSMF1Q92530 271 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 NECAP2Q9NVZ3 263 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 LRFN1Q9P244 771 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 EDARQ9UNE0 448 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 hCG_38984A0A1B0GV85 526 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 B4E171 279 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 EDN3P14138 238 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 TSPAN7P41732 249 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 TMEM88Q6PEY1 159 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 OR4A4PQ8NGN8 299 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 ARL11Q969Q4 196 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 THOC3Q96J01 351 aaKnown RBP15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 HSF4Q9ULV5 492 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 KIAA1549Q9HCM3 1950 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 TOR1AO14656 332 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 CELA3AP09093 270 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF728P0DKX0 622 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 FCGR2CP31995 323 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 SSPNQ14714 243 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 NSUN5P2Q63ZY6 315 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 TMEM42Q69YG0 159 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 UQCC3Q6UW78 93 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 HES7Q9BYE0 225 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 TREM1Q9NP99 234 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 SLC7A11Q9UPY5 501 aa15.67■□□□□ 0.1
UBQLN4-201ENST00000368309 ABCA11PQ4W5N1 156 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 PUSL1Q8N0Z8 303 aaKnown RBP15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 TAF9BQ9HBM6 251 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 DNAJB11Q9UBS4 358 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 FAM96BQ9Y3D0 163 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 IFNA21P01568 189 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 SERPINA7P05543 415 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 OR5AC1P0C628 307 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 RPL12P30050 165 aaKnown RBP15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 NPBWR2P48146 333 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 FOXO1Q12778 655 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 MST1LQ2TV78 715 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 PDSS1Q5T2R2 415 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 CDCP2Q5VXM1 449 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 RTN4IP1Q8WWV3 396 aaPredicted RBP15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 DNAJC13O75165 2243 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 F8W036 122 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 K7EPK0 472 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 NME2P22392 152 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 GFRA1P56159 465 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 BLOC1S1P78537 153 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 DHRS11Q6UWP2 260 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 RAB11FIP2Q7L804 512 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 C5orf24Q7Z6I8 188 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 FAM71E2Q8N5Q1 922 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 CPNE2Q96FN4 548 aaPredicted RBP15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 GUCD1Q96NT3 240 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 BCO1Q9HAY6 547 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 LPAR3Q9UBY5 353 aa15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 NOSIPQ9Y314 301 aaKnown RBP15.66■□□□□ 0.1
UBQLN4-201ENST00000368309 OR7C1O76099 320 aaPredicted RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 FUT6P51993 359 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 PCBD1P61457 104 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 STK11Q15831 433 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 KRTAP27-1Q3LI81 207 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 SLC25A26Q70HW3 274 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 DOCK7Q96N67 2140 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 DECR2Q9NUI1 292 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF407Q9C0G0 2248 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 AGPAT2O15120 278 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 MRPL33O75394 65 aaKnown RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 ECI1P42126 302 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 RIPPLY2Q5TAB7 128 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 H3F3CQ6NXT2 135 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 ASCL4Q6XD76 172 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 LYZL2Q7Z4W2 148 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 OR5L1Q8NGL2 311 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 OR11L1Q8NGX0 322 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 TLNRD1Q9H1K6 362 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF629Q9UEG4 869 aaPredicted RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 KCNIP3Q9Y2W7 256 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 TERTO14746 1132 aaKnown RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 CYTIPO60759 359 aa15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 MMP7P09237 267 aaPredicted RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 FOXG1P55316 489 aaPredicted RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 CPNE4Q96A23 557 aaPredicted RBP15.65■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF442Q9H7R0 627 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms