RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF665Q9H7R5 613 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 SPINK9Q5DT21 86 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 SSX8Q7RTT4 187 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 CACNG5Q9UF02 275 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF141Q15928 474 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 RHBDD2Q6NTF9 364 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 FDX2Q6P4F2 183 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 OR2Y1Q8NGV0 311 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 NPAS1Q99742 590 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 SF3B5Q9BWJ5 86 aaKnown RBP13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 MS4A5Q9H3V2 200 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 KCNE1BA0A087WTH5 132 aa13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 MEX3AA1L020 520 aaKnown RBP13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 KIR2DL1P43626 348 aaPredicted RBP13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 KIR2DL2P43627 348 aaPredicted RBP13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
NUCKS1-201ENST00000367142 OPN1MWP04001 364 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 OPN1MW2P0DN77 364 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 OPN1MW3P0DN78 364 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 NPY1RP25929 384 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 CCKARP32238 428 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 GALR1P47211 349 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 MOGAT3Q86VF5 341 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 DUSP18Q8NEJ0 188 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 MS4A7Q9GZW8 240 aaPredicted RBP13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 KLK11Q9UBX7 282 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 SERGEFQ9UGK8 458 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 SFT2D2O95562 160 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 LINC00303Q3SY05 128 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF561Q8N587 486 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 SPICQ8N5J4 248 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 Q8WTZ3 238 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 PLPP3O14495 311 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 C5orf17Q8NAS9 161 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 WDR89Q96FK6 387 aaPredicted RBP13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 EML2O95834 649 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 RAC3P60763 192 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 NAA60Q9H7X0 242 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 LPAR3Q9UBY5 353 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 TRBV23-1A0A0A0MS06 115 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 MAP1LC3B2A6NCE7 125 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 PNPP00491 289 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 CST4P01036 141 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 PRF1P14222 555 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 COL9A1P20849 921 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 IGFBP6P24592 240 aaPredicted RBP13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 METAP1P53582 386 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 MAP1LC3BQ9GZQ8 125 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 CES1P1Q9UKY3 287 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 PCOLCE2Q9UKZ9 415 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 SIGLEC7Q9Y286 467 aa13.94□□□□□ -0.18
NUCKS1-201ENST00000367142 HMX2A2RU54 273 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 BMPR1BO00238 502 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF207O43670 478 aaKnown RBP13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 FAM87AP0C7U9 286 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 MAGEA5P43359 124 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 SLC37A1P57057 533 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 UBE2L3P68036 154 aaKnown RBP13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 TMUB1Q9BVT8 246 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 RNF212Q495C1 297 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 WDR74Q6RFH5 385 aaPredicted RBP13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 NUBPLQ8TB37 319 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 OIT3Q8WWZ8 545 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 RABAC1Q9UI14 185 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 ZMIZ1Q9ULJ6 1067 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 FAM24AA6NFZ4 105 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 TBX19O60806 448 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 BCL3P20749 454 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 Q6ZNX1 250 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 C6orf201Q7Z4U5 140 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 SLC26A10Q8NG04 563 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 TMEM167BQ9NRX6 74 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 ICMTO60725 284 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 SFTA3P0C7M3 94 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 FABP4P15090 132 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 FSCN3Q9NQT6 498 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 CTSVO60911 334 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 HAND1O96004 215 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 CISD3P0C7P0 127 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 C12orf73Q69YU5 71 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 WDR73Q6P4I2 378 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 OR6X1Q8NH79 312 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 PERPQ96FX8 193 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 RPP25Q9BUL9 199 aaKnown RBP13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 TMPRSS13Q9BYE2 586 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 TECRQ9NZ01 308 aaKnown RBP13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 NTMQ9P121 344 aa13.93□□□□□ -0.18
NUCKS1-201ENST00000367142 PSMB2P49721 201 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 C21orf58P58505 322 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 SRSF5Q13243 272 aaKnown RBP13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 ZBTB37Q5TC79 503 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 VWA1Q6PCB0 445 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms