RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 OR12D2P58182 307 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TMEM244Q5VVB8 128 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 UTS2BQ765I0 119 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PPP1R35Q8TAP8 253 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RNFT2Q96EX2 444 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MBOAT4Q96T53 435 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SSX3Q99909 188 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ZNF649Q9BS31 505 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 HEXA-AS1Q9H8Q6 139 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 IMPAD1Q9NX62 359 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR14J1Q9UGF5 321 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 DSCAML1Q8TD84 2053 aa11.1□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TMEM82A0PJX8 343 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BTBD17A6NE02 478 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 H3BUX3 64 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLC16A6O15403 523 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SERPINA3P01011 423 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RBP4P02753 201 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ACTC1P68032 377 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ACTA1P68133 377 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ZIK1Q3SY52 487 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 DHRS7BQ6IAN0 325 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLC25A26Q70HW3 274 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TCF23Q7RTU1 214 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FAM220AQ7Z4H9 259 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 EGFL6Q8IUX8 553 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR8H2Q8N162 312 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CBR4Q8N4T8 237 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 LGALS12Q96DT0 336 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PELI1Q96FA3 418 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BORCS8Q96FH0 119 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ADI1Q9BV57 179 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 IL36RNQ9UBH0 155 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FBLN5Q9UBX5 448 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 NOTCH1P46531 2555 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 TRBV2A0A0J9YWF9 115 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 DAPL1A0PJW8 107 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR4C45A6NMZ5 311 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 VGLL3A8MV65 326 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 MT-ND2P03891 347 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 PAX6P26367 422 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 NPBWR2P48146 333 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RBP2P50120 134 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 BMXP51813 675 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ZNF146Q15072 292 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 CNN3Q15417 329 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 LRRC75BQ2VPJ9 315 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 LDLRAD2Q5SZI1 272 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 Q8IYB0 196 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ENTHD1Q8IYW4 607 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 ACBD7Q8N6N7 88 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR52N4Q8NGI2 321 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR51A4Q8NGJ6 313 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 OR10AC1Q8NH08 325 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 RHOXF1Q8NHV9 184 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 FGGYQ96C11 551 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SNX22Q96L94 193 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 SLC29A1Q99808 456 aa11.09□□□□□ -0.63
TNFRSF1A-202ENST00000366159 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 hCG_1809904A0A1W2PP81 198 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 A0A1W2PPE2 198 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 A0A1W2PR64 198 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 A0A1W2PRV1 198 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PSPNO60542 156 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 IGHA1P01876 353 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF728P0DKX0 622 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ATF1P18846 271 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 AZGP1P25311 298 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ATP1B3P54709 279 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF91Q05481 1191 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MEF2CQ06413 473 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 GALEQ14376 348 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 RNF144BQ7Z419 303 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ASCC1Q8N9N2 400 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 OR11H6Q8NGC7 330 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PPA2Q9H2U2 334 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 MRPS18AQ9NVS2 196 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 RBFOX1Q9NWB1 397 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ORC6Q9Y5N6 252 aa11.08□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 IGKV1-12A0A0C4DH73 117 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 J3QLW9 94 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 TIMM23O14925 209 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 HAND1O96004 215 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 IGKV1D-12P01611 117 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 HTR1AP08908 422 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 IGHV1-8P0DP01 117 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PIPP12273 146 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 ZNF19P17023 458 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 BCL3P20749 454 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 PRKACBP22694 351 aa11.07□□□□□ -0.64
TNFRSF1A-202ENST00000366159 KIR2DS4P43632 304 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms