RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PLPP3O14495 311 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 CYTIPO60759 359 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 GZMBP10144 247 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 GP1BBP13224 206 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 CCL20P78556 96 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 SLC10A1Q14973 349 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 OR5AS1Q8N127 324 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 FAM89BQ8N5H3 189 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 CYB561D1Q8N8Q1 229 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF248Q8NDW4 579 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
UBAP1-202ENST00000359544 GPER1Q99527 375 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 MOB1AQ9H8S9 216 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 AK3Q9UIJ7 227 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 CPAMD8Q8IZJ3 1885 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 ST8SIA3O43173 380 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 XRCC2O43543 280 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 HCRTR2O43614 444 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 IGLV3-19P01714 112 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 DUSP1P28562 367 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 AKT2P31751 481 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 RND2P52198 227 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 HLA-DRB3P79483 266 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 ICAM4Q14773 271 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 C9orf40Q8IXQ3 194 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 ADAMTS18Q8TE60 1221 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 SLAMF6Q96DU3 332 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 RBMXL1Q96E39 390 aaKnown RBP13.07□□□□□ -0.32
UBAP1-202ENST00000359544 KLHDC3Q9BQ90 382 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 GPR87Q9BY21 358 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF700Q9H0M5 742 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 PILRBQ9UKJ0 227 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 METTL12A8MUP2 240 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 CA11O75493 328 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 DFFBO76075 338 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 DIRAS3O95661 229 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 PGCP20142 388 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 TRIM61Q5EBN2 209 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 SNX22Q96L94 193 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 FBRSQ9HAH7 460 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 CLDN34H7C241 214 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 NUDT14O95848 222 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 GCGP01275 180 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 HPNP05981 417 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 SFTPDP35247 375 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
UBAP1-202ENST00000359544 FZD2Q14332 565 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 TMEM176BQ3YBM2 270 aaPredicted RBP13.06□□□□□ -0.32
UBAP1-202ENST00000359544 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 OR14L1PQ8NHC6 308 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 CA5BP1Q8WTZ4 195 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 PECRQ9BY49 303 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 DECR2Q9NUI1 292 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 RALGAPA1Q6GYQ0 2036 aa13.06□□□□□ -0.32
UBAP1-202ENST00000359544 A0A1W2PP11 408 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 SLC31A1O15431 190 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 HSPA12AO43301 675 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 CLPSP04118 112 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 POLR2HP52434 150 aaKnown RBP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 GNMTQ14749 295 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 RD3Q7Z3Z2 195 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 RNF144BQ7Z419 303 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 ZFP62Q8NB50 900 aaPredicted RBP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 OR10G4Q8NGN3 311 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 OR51E1Q8TCB6 317 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 OR1E3Q8WZA6 343 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 POM121Q96HA1 1249 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 NAA60Q9H7X0 242 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF701Q9NV72 531 aaPredicted RBP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 TMED7-TICAM2A0A0A6YYA0 188 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 PLRG1O43660 514 aaKnown RBP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 AHSA1O95433 338 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 HBE1P02100 147 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 OR5AC1P0C628 307 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 PGA4P0DJD7 388 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 PGA5P0DJD9 388 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 EWSR1Q01844 656 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 TMEM187Q14656 261 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 TAF9Q16594 264 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 C4orf17Q53FE4 359 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 PLA2G2CQ5R387 149 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 KIAA0895LQ68EN5 471 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 COMMD2Q86X83 199 aa13.05□□□□□ -0.32
UBAP1-202ENST00000359544 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
UBAP1-202ENST00000359544 TRBV24-1A0A075B6N3 115 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
UBAP1-202ENST00000359544 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 H0Y8X5 98 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 PRKNO60260 465 aaPredicted RBP13.04□□□□□ -0.32
UBAP1-202ENST00000359544 NPIPB7O75200 414 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 FOLR1P15328 257 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 GABRR1P24046 479 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms